CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73635	Canola	cytosol, plastid	100.0	100.0
CDY13832	Canola	cytosol, plastid	100.0	100.0
CDX78958	Canola	cytosol, plastid	100.0	100.0
VIT_01s0137g00470.t01	Wine grape	cytosol	37.55	67.97
Bra036782.1-P	Field mustard	cytosol, plastid	100.0	67.23
CDX78026	Canola	cytosol, plastid	100.0	67.23
CDX73705	Canola	cytosol, plastid	99.28	66.75
AT3G51670.1	Thale cress	cytosol	89.89	60.88
Zm00001d052665_P001	Maize	cytosol	41.16	56.44
CDX90637	Canola	cytosol	81.59	56.22
KRH76050	Soybean	cytosol	74.73	49.17
Solyc09g015080.2.1	Tomato	cytosol, plastid	75.09	49.06
KRH65546	Soybean	cytosol	74.01	48.69
PGSC0003DMT400030364	Potato	plastid	74.37	48.36
KRH00348	Soybean	cytosol	73.65	46.9
VIT_08s0058g00640.t01	Wine grape	cytosol, mitochondrion, nucleus	74.73	46.1
Os05t0345100-00	Rice	plastid	51.62	45.83
EES18028	Sorghum	plastid	65.7	42.23
GSMUA_Achr2P18920_001	Banana	plastid	64.26	42.18
Zm00001d038005_P001	Maize	mitochondrion, plastid	63.54	41.12
GSMUA_Achr3P09950_001	Banana	plastid	62.82	41.04
GSMUA_Achr5P07450_001	Banana	plastid	58.48	40.91
TraesCS1D01G202700.1	Wheat	plastid	62.09	40.66
TraesCS1A01G198900.1	Wheat	plastid	61.73	40.43
TraesCS1B01G213900.1	Wheat	plastid	61.73	40.43
GSMUA_Achr9P17890_001	Banana	cytosol	57.04	40.1
CDY29036	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	79.78	37.08
Zm00001d010049_P001	Maize	plastid	64.98	35.86
CDY71835	Canola	cytosol	31.77	30.77
CDX90715	Canola	cytosol	33.21	29.68
CDY50441	Canola	plasma membrane	45.49	25.98
CDY03654	Canola	nucleus	45.85	25.97
CDX82180	Canola	nucleus	45.85	25.97
CDY02316	Canola	cytosol	36.46	23.43
CDY50723	Canola	nucleus	44.04	23.02
CDX68278	Canola	cytosol	36.46	23.01
CDX77578	Canola	cytosol	44.04	22.93
CDY09549	Canola	nucleus	44.04	22.8
CDY71842	Canola	cytosol	38.27	22.04
CDX68279	Canola	cytosol	36.82	19.21
CDY03655	Canola	cytosol	38.63	18.94
CDY05051	Canola	nucleus	47.29	18.88
CDX96377	Canola	cytosol	37.55	18.7
CDX82182	Canola	cytosol	38.63	18.61
CDY66581	Canola	cytosol	38.99	17.25
CDY21368	Canola	cytosol	38.99	16.56
HORVU1Hr1G051510.3	Barley	plastid	18.05	10.68
CDY58916	Canola	cytosol	1.08	2.17
Os05t0345175-01	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	GO:A0A078FLG0	UniProt:A0A078FLG0	ProteinID:CDY13832.1	EnsemblPlants:CDY29572
ProteinID:CDY29572	ProteinID:CDY29572.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf
EnsemblPlantsGene:GSBRNA2T00043296001	InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180
PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF57	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI0004EE5B85	SEG:seg	:	:	:

Description

BnaA03g54170DBnaA03g54170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLG0]

Coordinates

chrLK032239:+:365924..367397

Molecular Weight (calculated)

32020.6 Da

IEP (calculated)

8.893

GRAVY (calculated)

-0.464

Length

277 amino acids

Sequence
(BLAST)

001: MDSALSPSPF DPTKTPNAEP KKSFMSSLIT LRSNHFKEDT YFVSELKPAE QKALQDLKEK LSSSSFGASS MWGVPLLGGD DRADVILLKF LRARDFKVGD
101: SLRMLEKCLE WREEFKAEKL TEEDLGFKDL EGKVAYMRGY DKEGHPVCYN AYGVFKEREM YERVFGDDEK LKSFLRWRVQ VLERGVKMLH FKPGGVNSMI
201: QVTDLKDMPK RELRVASNQI LSLFQDNYPE MVATKIFINV PWYFSVIYSM FSPFLTHRTK SKFVMSKEGN AAETLYK

Best Arabidopsis Sequence Match ( AT1G72160.1 )
(BLAST)

001: MAEEPTTTTL VTPEKLPSPS LTPSEVSEST QDALPTETET LEKVTETNPP ETADTTTKPE EETAAEHHPP TVTETETAST EKQEVKDEAS QKEVAEEKKS
101: MIPQNLGSFK EESSKLSDLS NSEKKSLDEL KHLVREALDN HQFTNTPEEV KIWGIPLLED DRSDVVLLKF LRAREFKVKD SFAMLKNTIK WRKEFKIDEL
201: VEEDLVDDLD KVVFMHGHDR EGHPVCYNVY GEFQNKELYN KTFSDEEKRK HFLRTRIQFL ERSIRKLDFS SGGVSTIFQV NDMKNSPGLG KKELRSATKQ
301: AVELLQDNYP EFVFKQAFIN VPWWYLVFYT VIGPFMTPRS KSKLVFAGPS RSAETLFKYI SPEQVPVQYG GLSVDPCDCN PDFSLEDSAS EITVKPGTKQ
401: TVEIIIYEKC ELVWEIRVTG WEVSYKAEFV PEEKDAYTVV IQKPRKMRPS DEPVLTHSFK VNELGKVLLT VDNPTSKKKK LVYRFNVKPL

Arabidopsis Description

PATL3Patellin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q56Z59]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.