CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026229.1-P	Field mustard	cytosol	99.44	99.44
CDY50723	Canola	nucleus	86.84	87.17
CDY02316	Canola	cytosol	69.36	85.61
CDY09549	Canola	nucleus	82.52	82.06
AT1G30690.2	Thale cress	cytosol	76.5	75.37
KRH11846	Soybean	cytosol	55.08	63.01
KRH36854	Soybean	cytosol	54.7	62.31
VIT_10s0003g05480.t01	Wine grape	cytosol	55.45	61.97
Solyc02g070210.2.1	Tomato	cytosol	49.44	55.84
PGSC0003DMT400054383	Potato	cytosol	48.87	55.32
GSMUA_Achr9P30580_001	Banana	cytosol	52.07	50.92
EER88801	Sorghum	cytosol	47.93	48.85
Zm00001d046995_P001	Maize	plasma membrane	47.93	48.2
CDX90715	Canola	cytosol	27.82	47.74
HORVU7Hr1G107070.1	Barley	cytosol	46.24	45.47
TraesCS7B01G368100.1	Wheat	nucleus	47.74	44.88
TraesCS7A01G466800.1	Wheat	cytosol	46.43	44.5
TraesCS7D01G454600.1	Wheat	cytosol	47.74	44.41
Os06t0671800-01	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	30.08	44.08
CDY13832	Canola	cytosol, plastid	22.93	44.04
CDX73635	Canola	cytosol, plastid	22.93	44.04
CDY29572	Canola	cytosol, plastid	22.93	44.04
CDX78958	Canola	cytosol, plastid	22.93	44.04
CDX78026	Canola	cytosol, plastid	33.27	42.96
CDX73705	Canola	cytosol, plastid	32.89	42.48
CDY58916	Canola	cytosol	10.71	41.3
CDX90637	Canola	cytosol	31.02	41.04
CDY03654	Canola	nucleus	37.03	40.29
CDX82180	Canola	nucleus	37.03	40.29
CDY50441	Canola	plasma membrane	36.28	39.79
CDX68278	Canola	cytosol	31.02	37.59
CDX68279	Canola	cytosol	33.08	33.15
CDX96377	Canola	cytosol	33.83	32.37
CDY03655	Canola	cytosol	34.02	32.04
CDX82182	Canola	cytosol	34.02	31.48
CDY71842	Canola	cytosol	26.69	29.52
CDY71835	Canola	cytosol	15.79	29.37
CDY29036	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	30.83	27.52
CDY05051	Canola	nucleus	35.15	26.95
CDY21368	Canola	cytosol	31.95	26.07
CDY66581	Canola	cytosol	29.14	24.76

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	GO:A0A078CR31	EnsemblPlants:CDX77578	ProteinID:CDX77578	ProteinID:CDX77578.1
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	InterPro:GOLD_dom
InterPro:GOLD_dom_sf	EnsemblPlantsGene:GSBRNA2T00128490001	InterPro:IPR001251	InterPro:IPR009038	InterPro:IPR036865	PFAM:PF00650
PFAM:PF03765	PFscan:PS50191	PFscan:PS50866	PANTHER:PTHR23324	PANTHER:PTHR23324:SF139	SMART:SM00516
SMART:SM01100	SUPFAM:SSF101576	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0004EF13D1	SEG:seg

Description

BnaA07g07160D

Coordinates

chrLK031811:-:2004003..2006355

Molecular Weight (calculated)

59815.5 Da

IEP (calculated)

4.488

GRAVY (calculated)

-0.536

Length

532 amino acids

Sequence
(BLAST)

001: MTAEVKVEEK QVESEVVIAS AVAPVEETTV KAVVEEEVDG SEAKVVEKSS SFKEESDFFS DLKDSEKKAL SDLKTKLEEA IVENTLFKKK KETPVKVVEK
101: KKAEEDKAVV TEEAKAEERP KEEAKTDAVV TEEAKAETIE DVVQKESPKE EEVKTEADVV DTKEAEIAEE EKKTEEAVVT KEATVEQEEE DEIVDNDIEL
201: WGVPLLPSKG AEGTDVILLK FLRARDFKVN DAFEMLKKTL KWRKEQKIDS VLGEDFGEDL ASAAYMNGLD RESRPVCYNV YQTTFGSEQS RENLLRWRFQ
301: LMEKGIQKLD LKPGGVTSLL QIHDLKNCPG LSKTELWVAI KNAIVALQDN YPELVSKNVF INVPLWFYAV STFLSPFLTQ RTKSKFVVTR PANATETLLK
401: YIPAEEIPVQ YGGFKRDDDN EFSNEAVSEV VVKPGSSETI EIPATETEGT LVWDVAVLGW EVNYKEEFVP ADEGAYTIIV QKVKKIGSNE GPVRNSFKNS
501: ESGKIVLTVD NVSSKKKKRV LYRYRTKTES SC

Best Arabidopsis Sequence Match ( AT1G30690.2 )
(BLAST)

001: MTAEVKVEEK QVESEVVIAP AVVPEETTVK AVVEETKVEE DESKPEGVEK SASFKEESDF FADLKESEKK ALSDLKSKLE EAIVDNTLLK TKKKESSPMK
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS

Arabidopsis Description

PATL4Patellin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q94C59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.