Factsheet for GSMUA_Achr9P30580_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g05480.t01	Wine grape	cytosol	54.04	61.76
KRH11846	Soybean	cytosol	51.1	59.78
KRH36854	Soybean	cytosol	51.29	59.74
PGSC0003DMT400054383	Potato	cytosol	48.71	56.38
Solyc02g070210.2.1	Tomato	cytosol	48.71	56.26
EER88801	Sorghum	cytosol	52.94	55.17
Zm00001d046995_P001	Maize	plasma membrane	52.94	54.44
CDY02316	Canola	cytosol	43.01	54.29
Bra023118.1-P	Field mustard	cytosol	48.53	53.77
AT1G30690.2	Thale cress	cytosol	52.76	53.15
CDX77578	Canola	cytosol	50.92	52.07
Bra026229.1-P	Field mustard	cytosol	50.74	51.88
CDY09549	Canola	nucleus	50.92	51.78
CDY50723	Canola	nucleus	50.0	51.32
HORVU7Hr1G107070.1	Barley	cytosol	50.37	50.65
GSMUA_Achr1P05640_001	Banana	cytosol	38.05	49.88
GSMUA_Achr2P08100_001	Banana	cytosol	36.4	49.87
TraesCS7A01G466800.1	Wheat	cytosol	49.82	48.83
TraesCS7B01G368100.1	Wheat	nucleus	50.0	48.06
TraesCS7D01G454600.1	Wheat	cytosol	50.37	47.9
Os06t0671800-01	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	31.62	47.38
VIT_19s0085g00280.t01	Wine grape	cytosol	48.35	46.63
GSMUA_Achr2P18920_001	Banana	plastid	33.82	43.6
GSMUA_Achr9P08580_001	Banana	cytosol, plasma membrane	36.4	43.42
GSMUA_Achr7P23220_001	Banana	cytosol	39.89	43.4
GSMUA_Achr9P17890_001	Banana	cytosol	30.15	41.62
GSMUA_Achr5P07450_001	Banana	plastid	29.78	40.91
GSMUA_Achr3P09950_001	Banana	plastid	31.25	40.09
GSMUA_Achr3P22170_001	Banana	cytosol	38.05	39.35
GSMUA_Achr6P07270_001	Banana	cytosol, nucleus, plastid	36.76	38.46
GSMUA_Achr6P18780_001	Banana	cytosol	40.07	37.59
GSMUA_Achr5P25970_001	Banana	cytosol	37.13	36.4
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	37.5	32.64

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf
ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0005886	GO:GO:0016020	EnsemblPlantsGene:GSMUA_Achr9G30580_001	EnsemblPlants:GSMUA_Achr9P30580_001	EnsemblPlants:GSMUA_Achr9T30580_001
InterPro:IPR001251	InterPro:IPR036865	UniProt:M0U4W5	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180
PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF48	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI000294DD24	SEG:seg	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G30580_001]

Coordinates

chr9:+:33816226..33818288

Molecular Weight (calculated)

61160.1 Da

IEP (calculated)

4.667

GRAVY (calculated)

-0.627

Length

544 amino acids

Sequence
(BLAST)

001: MTYEVSSDAG APTAADPVEE KVAAAADGDE RKTEVDTKVV ADVEEKKMPE PPSSDHPSVE KCSSFREESN FLSDLKEAEK KALIELRAKV EEAILEGKLL
101: LAKQEEQKPM EKKEEEVTER EKADPEAQGG GEGEQAKLDR GKEEEEEVDP ETREEGEEGE KVKLDQTADV KAEEKAAPLE EKAIATAASE AKNVGDSDKE
201: ATLWGVPLLP SKGSERADVI LLKFLRARDF KVKDAFEMLR NVLVWRKQFR IDSILDEESL GADFVAACYM DGVDRERHPV CYNMPGVFQN DNLYQETFGS
301: EQGRERFQRW RVQLMEKGIK ALDFKPGGVA SLLQITDLNN SPGPSKKELR TTMKQVVQLL QDNYPELVAR NIFINVPFWY YAFHALISPF LTQRTRSKFV
401: FARPAKVAET LLRYVPAEAV PVRYGGLKRD DDTEFSAEDG GVSEVIVKSN STETLEIPAP EGGTTIFWDL SVLGWEVSYK EEFVPTDEGS YTIVVRKSKK
501: MAAAELPVRN SFRNSEPGKV VLTIENNSFW KKKALYRYKI KKSC

Best Arabidopsis Sequence Match ( AT1G30690.2 )
(BLAST)

001: MTAEVKVEEK QVESEVVIAP AVVPEETTVK AVVEETKVEE DESKPEGVEK SASFKEESDF FADLKESEKK ALSDLKSKLE EAIVDNTLLK TKKKESSPMK
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS

Arabidopsis Description

PATL4Patellin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q94C59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.