Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G368100.1 | Wheat | nucleus | 93.71 | 94.7 |
| TraesCS7A01G466800.1 | Wheat | cytosol | 87.59 | 90.27 |
| HORVU7Hr1G107070.1 | Barley | cytosol | 83.22 | 87.99 |
| EER88801 | Sorghum | cytosol | 65.56 | 71.84 |
| Zm00001d046995_P001 | Maize | plasma membrane | 64.69 | 69.94 |
| Os06t0671800-01 | Rice | endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole | 42.48 | 66.94 |
| VIT_10s0003g05480.t01 | Wine grape | cytosol | 44.23 | 53.15 |
| KRH11846 | Soybean | cytosol | 41.43 | 50.97 |
| KRH36854 | Soybean | cytosol | 41.61 | 50.96 |
| GSMUA_Achr9P30580_001 | Banana | cytosol | 47.9 | 50.37 |
| Solyc02g070210.2.1 | Tomato | cytosol | 40.73 | 49.47 |
| PGSC0003DMT400054383 | Potato | cytosol | 40.38 | 49.15 |
| CDX77578 | Canola | cytosol | 44.41 | 47.74 |
| CDY02316 | Canola | cytosol | 35.84 | 47.56 |
| Bra026229.1-P | Field mustard | cytosol | 44.23 | 47.56 |
| CDY50723 | Canola | nucleus | 43.71 | 47.17 |
| Bra023118.1-P | Field mustard | cytosol | 40.03 | 46.64 |
| CDY09549 | Canola | nucleus | 42.66 | 45.61 |
| AT1G30690.2 | Thale cress | cytosol | 43.01 | 45.56 |
| VIT_19s0085g00280.t01 | Wine grape | cytosol | 41.78 | 42.38 |
| TraesCS1D01G202700.1 | Wheat | plastid | 30.07 | 40.66 |
| TraesCS3D01G378300.1 | Wheat | cytosol | 36.36 | 35.43 |
| TraesCS1D01G268600.1 | Wheat | golgi | 36.71 | 34.43 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf |
| ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005886 | GO:GO:0016020 | InterPro:IPR001251 | InterPro:IPR036865 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF96 | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | EnsemblPlantsGene:TraesCS7D01G454600 | EnsemblPlants:TraesCS7D01G454600.1 | TIGR:cd00170 | SEG:seg |
Description
No Description!
Coordinates
chr7D:-:573829229..573831144
Molecular Weight (calculated)
62199.4 Da
IEP (calculated)
4.809
GRAVY (calculated)
-0.491
Length
572 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVEVVSGGA VEAVAPAKEV SAKVEVEAGA AAVAVAKNMS FREESNRLGD LKDAERKALA ELRAKVEEAI VEGKLFDDDS ASVKVKAKVE PKKKEGKKKE
101: GKKKKAEEKK EEAAADEKKP EVAAEEKKED AVEAGEEKKE EEAKEEVAVA EPAEEKQEEA VAAEEKQEEA VAAEEKQEEA AEEKKEPEAE AAAEKEETAA
201: VEAEKAAPVA AAVVDKDVAL WGVPLLPSKG DEATDVVLLK FLRARDFKAG AAFDMLRRTL RWRREWKSLA ATAADGDDDE GDALPEGACV LDGADREGHP
301: VCYNALGVFA DEGVYRSALG TDGGKKPARF LRWRVRAMER HVAELDFRPG GAASLLQVTD LRGSPGPARK DLRVAMKQVL DLFQDNYPEL VARNILINVP
401: FSYYAFTTVF FPFLTQRTKS KLVVARPSKV TETLLKYIPI EAIPVKYGGL KRDGDTEFAG EHDAEIAEVV VKANSTETIE IEAAEGDTTL TWDVTVLGWE
501: VRYTEEFVPA DEGAYTIVVS KGRKVGAGEE AVRNSFRAAE AGKVVITVEN ATRGRKRGLF RHKAKSALAK KC
101: GKKKKAEEKK EEAAADEKKP EVAAEEKKED AVEAGEEKKE EEAKEEVAVA EPAEEKQEEA VAAEEKQEEA VAAEEKQEEA AEEKKEPEAE AAAEKEETAA
201: VEAEKAAPVA AAVVDKDVAL WGVPLLPSKG DEATDVVLLK FLRARDFKAG AAFDMLRRTL RWRREWKSLA ATAADGDDDE GDALPEGACV LDGADREGHP
301: VCYNALGVFA DEGVYRSALG TDGGKKPARF LRWRVRAMER HVAELDFRPG GAASLLQVTD LRGSPGPARK DLRVAMKQVL DLFQDNYPEL VARNILINVP
401: FSYYAFTTVF FPFLTQRTKS KLVVARPSKV TETLLKYIPI EAIPVKYGGL KRDGDTEFAG EHDAEIAEVV VKANSTETIE IEAAEGDTTL TWDVTVLGWE
501: VRYTEEFVPA DEGAYTIVVS KGRKVGAGEE AVRNSFRAAE AGKVVITVEN ATRGRKRGLF RHKAKSALAK KC
001: MTAEVKVEEK QVESEVVIAP AVVPEETTVK AVVEETKVEE DESKPEGVEK SASFKEESDF FADLKESEKK ALSDLKSKLE EAIVDNTLLK TKKKESSPMK
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS
Arabidopsis Description
PATL4Patellin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q94C59]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.