Factsheet for Bra026229.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77578	Canola	cytosol	99.44	99.44
Bra023118.1-P	Field mustard	cytosol	78.2	84.73
AT1G30690.2	Thale cress	cytosol	76.13	75.0
KRH11846	Soybean	cytosol	54.89	62.8
KRH36854	Soybean	cytosol	54.51	62.1
VIT_10s0003g05480.t01	Wine grape	cytosol	55.45	61.97
Solyc02g070210.2.1	Tomato	cytosol	49.25	55.63
PGSC0003DMT400054383	Potato	cytosol	48.68	55.11
GSMUA_Achr9P30580_001	Banana	cytosol	51.88	50.74
EER88801	Sorghum	cytosol	47.74	48.66
Zm00001d046995_P001	Maize	plasma membrane	47.74	48.02
Bra000675.1-P	Field mustard	cytosol	27.82	47.74
HORVU7Hr1G107070.1	Barley	cytosol	46.05	45.29
TraesCS7B01G368100.1	Wheat	nucleus	47.56	44.7
TraesCS7A01G466800.1	Wheat	cytosol	46.24	44.32
TraesCS7D01G454600.1	Wheat	cytosol	47.56	44.23
Os06t0671800-01	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	30.08	44.08
Bra036782.1-P	Field mustard	cytosol, plastid	33.08	42.72
Bra008013.1-P	Field mustard	nucleus	37.22	39.92
Bra003891.1-P	Field mustard	cytosol	36.09	38.1
Bra012843.1-P	Field mustard	cytosol	30.83	37.1
Bra016084.1-P	Field mustard	cytosol	34.21	32.62
Bra008012.1-P	Field mustard	cytosol	34.02	32.21
Bra003892.1-P	Field mustard	cytosol	30.26	30.84
Bra040854.1-P	Field mustard	cytosol	34.59	26.06

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlantsGene:Bra026229	EnsemblPlants:Bra026229.1	EnsemblPlants:Bra026229.1-P	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	InterPro:GOLD_dom	InterPro:GOLD_dom_sf
InterPro:IPR001251	InterPro:IPR009038	InterPro:IPR036865	UniProt:M4EBS0	PFAM:PF00650	PFAM:PF03765
PFscan:PS50191	PFscan:PS50866	PANTHER:PTHR23324	PANTHER:PTHR23324:SF139	SMART:SM00516	SMART:SM01100
SUPFAM:SSF101576	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0002544310	SEG:seg	:

Description

AT1G30690 (E=2e-173) | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein

Coordinates

chrA01:-:10511237..10513109

Molecular Weight (calculated)

59746.4 Da

IEP (calculated)

4.468

GRAVY (calculated)

-0.529

Length

532 amino acids

Sequence
(BLAST)

001: MTAEVKVEEK QVESEVVIAS AVAPVEETTV KAVVEEEVDG SEAKVVEKSS SFKEESDFFS DLKDSEKKAL SDLKTKLEEA IVENTLFKKK KETPVKVVEK
101: KKAEEDKAVV TEEAKAEESP KEEAKTDAVV TEEAKAETIE DVVQKESPKE EEVKTEADVV DTKEAEIAEE EKKTEEAVVT KEATVEQEEE EEIVDNDIEL
201: WGVPLLPSKG AEGTDVILLK FLRARDFKVN DAFEMLKKTL KWRKEQKIDS VLGEDFGEDL ASAAYMNGLD RESRPVCYNV YQTTFGSEQS RENLLRWRFQ
301: LMEKGIQKLD LKPGGVTSLL QIHDLKNCPG LSKTELWVAI KNAIVALQDN YPELVSKNVF INVPLWFYAV STFLSPFLTQ RTKSKFVVTR PANATDTLLK
401: YIPAEEIPVQ YGGFKRDDDN EFSNEAVSEV VVKPGSSETI EIPATETEGT LVWDVAVLGW EVNYKEEFVP ADEGAYTIIV QKVKKIGSNE GPVRNSFKNS
501: ESGKIVLTVD NVSSKKKKRV LYRYRTKTES SC

Best Arabidopsis Sequence Match ( AT1G30690.2 )
(BLAST)

001: MTAEVKVEEK QVESEVVIAP AVVPEETTVK AVVEETKVEE DESKPEGVEK SASFKEESDF FADLKESEKK ALSDLKSKLE EAIVDNTLLK TKKKESSPMK
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS

Arabidopsis Description

PATL4Patellin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q94C59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.