Factsheet for Bra040854.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21368	Canola	cytosol	90.93	98.47
AT1G22530.1	Thale cress	cytosol	76.06	78.62
Bra008012.1-P	Field mustard	cytosol	55.95	70.28
Bra016084.1-P	Field mustard	cytosol	54.67	69.18
Bra003892.1-P	Field mustard	cytosol	50.99	68.97
GSMUA_Achr2P08100_001	Banana	cytosol	30.88	54.91
Zm00001d041705_P001	Maize	cytosol, mitochondrion	8.07	53.27
KRG99105	Soybean	cytosol	10.76	51.35
HORVU3Hr1G082150.1	Barley	cytosol	24.93	51.16
GSMUA_Achr7P23220_001	Banana	cytosol	34.56	48.8
Zm00001d005304_P001	Maize	mitochondrion	18.7	48.53
Bra000675.1-P	Field mustard	cytosol	21.1	48.06
Zm00001d005249_P001	Maize	mitochondrion	18.84	48.01
GSMUA_Achr9P08580_001	Banana	cytosol, plasma membrane	30.88	47.81
Solyc06g064940.2.1	Tomato	nucleus	38.81	47.24
Zm00001d043169_P001	Maize	cytosol	13.88	46.45
PGSC0003DMT400013297	Potato	cytosol	37.68	46.1
Solyc11g051160.1.1	Tomato	extracellular, plastid	38.24	45.84
Zm00001d012254_P003	Maize	mitochondrion	35.41	44.96
VIT_18s0041g00430.t01	Wine grape	cytosol	38.53	44.88
GSMUA_Achr6P18780_001	Banana	cytosol	36.69	44.66
KRH23751	Soybean	endoplasmic reticulum	38.24	44.55
GSMUA_Achr5P25970_001	Banana	cytosol	34.42	43.78
KRH44929	Soybean	endoplasmic reticulum	35.27	43.23
GSMUA_Achr6P07270_001	Banana	cytosol, nucleus, plastid	31.59	42.88
KXG33790	Sorghum	cytosol	35.84	42.88
Os05t0429400-01	Rice	plasma membrane	35.41	42.73
TraesCS3B01G417500.1	Wheat	golgi	34.99	42.73
TraesCS3A01G385300.1	Wheat	cytosol	34.84	42.56
Zm00001d042664_P001	Maize	plasma membrane	34.42	42.56
Bra008013.1-P	Field mustard	nucleus	29.6	42.14
OQU78068	Sorghum	cytosol	31.02	41.63
Zm00001d038262_P001	Maize	plasma membrane	36.54	41.61
Bra003891.1-P	Field mustard	cytosol	29.6	41.47
GSMUA_Achr3P22170_001	Banana	cytosol	30.88	41.44
Os01t0874700-01	Rice	plasma membrane	35.98	41.44
EES10230	Sorghum	cytosol	29.89	41.21
TraesCS1B01G279200.1	Wheat	cytosol	35.55	41.15
TraesCS3D01G378300.1	Wheat	cytosol	33.99	40.89
TraesCS1A01G268500.1	Wheat	cytosol	34.99	40.49
TraesCS1D01G268600.1	Wheat	golgi	34.84	40.33
Zm00001d010205_P002	Maize	cytosol	30.45	39.89
HORVU3Hr1G082110.2	Barley	plastid	34.7	37.98
Bra036782.1-P	Field mustard	cytosol, plastid	22.1	37.86
HORVU1Hr1G075150.4	Barley	plasma membrane	35.13	37.35
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	32.15	36.32
Bra026229.1-P	Field mustard	cytosol	26.06	34.59
Bra023118.1-P	Field mustard	cytosol	23.8	34.22
Bra012843.1-P	Field mustard	cytosol	20.25	32.35

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlantsGene:Bra040854	EnsemblPlants:Bra040854.1	EnsemblPlants:Bra040854.1-P	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	GO:GO:0002020	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005886	GO:GO:0009507	GO:GO:0009536	GO:GO:0016020	InterPro:GOLD_dom	InterPro:GOLD_dom_sf
InterPro:IPR001251	InterPro:IPR009038	InterPro:IPR036865	UniProt:M4FIC5	PFAM:PF00650	PFAM:PF03765
PRINTS:PR00180	PFscan:PS50191	PFscan:PS50866	PANTHER:PTHR23324	PANTHER:PTHR23324:SF96	SMART:SM00516
SMART:SM01100	SUPFAM:SSF101576	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000253E971	SEG:seg

Description

AT1G22530 (E=9e-245) PATL2 | PATL2 (PATELLIN 2); transporter

Coordinates

chrScaffold000282:+:4995..8416

Molecular Weight (calculated)

78191.6 Da

IEP (calculated)

4.710

GRAVY (calculated)

-0.515

Length

706 amino acids

Sequence
(BLAST)

001: MAQEEIQKPA ASTTTAPVPA KEETPVVPPV KEVSAPVTTD KSVTAPAPES KEEKVVSEKE APVTVTETEV TVEEPEVTVE KVEEIMTGKV IAHTESFKEE
101: GYLASELTEA EKNALAEFKE MVREALNKHE FTAPPAKEET VEEKKREETE EVAETITEEK SAAPTVVETK KEETSAVPAP EETKPAAPAA AEIKKEEKPV
201: APTPVESKLA APVVTETKKE ETLAPVETKP AAPVVTETKK EEAKPAAPVT TETKKEEKPP VTTETKKEEK PAPVETKPAA PVTAETKKEE KPAPVETKPA
301: APVTTETKKE EEKAVTSAPV ETKPATPVTT EVVTIEKAFA AEQEEATKTV EAIEESIVSI TLPETAVSVE PEEVSIWGIP LLEDERSDVI LLKFLRARDF
401: KVKEAFTMLK NTVQWRKENN MDELLAEDLQ GAEFEKMVFT HGVDKQGHVV IYSSYGEFQN KEIFSDKEKL NKFLKWRIQF QEKCVRSLDF SPEAKSSFVF
501: VSDFRNAPGL GKRSLWQFIR RAVKQFEDNY PEFVAKELFI NVPWWYIPYY KTFGNIIISP RTRSKMVLAG PSKTAETIFK YVAPEVVPVK YGGLSKESPF
601: AVEDGVTEAV VKSSAKHIIE LPASEGSTLS WELRVLGADV SYGAQFEPTN EASYTVIVSK NRKIGLTDEP VITDSFKAGE PGKIVITIDN NTFKKKKVIY
701: RFKTQA

Best Arabidopsis Sequence Match ( AT1G22530.1 )
(BLAST)

001: MAQEEIQKPT ASVPVVKEET PAPVKEVEVP VTTEKAVAAP APEATEEKVV SEVAVPETEV TAVKEEEVAT GKEILQSESF KEEGYLASEL QEAEKNALAE
101: LKELVREALN KREFTAPPPP PAPVKEEKVE EKKTEETEEK KEEVKTEEKS LEAETKEEEK SAAPATVETK KEEILAAPAP IVAETKKEET PVAPAPVETK
201: PAAPVVAETK KEEILPAAPV TTETKVEEKV VPVETTPAAP VTTETKEEEK AAPVTTETKE EEKAAPGETK KEEKATASTQ VKRASKFIKD IFVSVTTSEK
301: KKEEEKPAVV TIEKAFAADQ EEETKTVEAV EESIVSITLP ETAAYVEPEE VSIWGIPLLE DERSDVILLK FLRARDFKVK EAFTMLKNTV QWRKENKIDD
401: LVSEDLEGSE FEKLVFTHGV DKQGHVVIYS SYGEFQNKEI FSDKEKLSKF LKWRIQFQEK CVRSLDFSPE AKSSFVFVSD FRNAPGLGQR ALWQFIKRAV
501: KQFEDNYPEF VAKELFINVP WWYIPYYKTF GSIITSPRTR SKMVLSGPSK SAETIFKYVA PEVVPVKYGG LSKDSPFTVE DGVTEAVVKS TSKYTIDLPA
601: TEGSTLSWEL RVLGADVSYG AQFEPSNEAS YTVIVSKNRK VGLTDEPVIT DSFKASEAGK VVITIDNQTF KKKKVLYRSK TQA

Arabidopsis Description

PATL2Patellin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q56ZI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.