Factsheet for Os05t0429400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 18557835
vacuole: 18557835
plastid: 21433289
plasma membrane: 27800704
plastid: 27992503
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 18557835 doi

SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis

Department of Biology Area 9, University of York, York YO10 5DD, UK.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os11t0124300-01
Os12t0122000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G72160.1	Os11t0124300-01	AT3G54220.1	19228333
AT1G72160.1	Os12t0122000-01	AT3G54220.1	19228333

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041705_P001	Maize	cytosol, mitochondrion	15.21	83.18
Zm00001d005304_P001	Maize	mitochondrion	37.61	80.88
Zm00001d005249_P001	Maize	mitochondrion	38.29	80.87
Zm00001d043169_P001	Maize	cytosol	28.89	80.09
TraesCS1A01G268500.1	Wheat	cytosol	79.83	76.56
TraesCS1D01G268600.1	Wheat	golgi	79.15	75.9
TraesCS1B01G279200.1	Wheat	cytosol	79.15	75.9
Zm00001d038262_P001	Maize	plasma membrane	79.32	74.84
Os01t0874700-01	Rice	plasma membrane	76.75	73.25
OQU78068	Sorghum	cytosol	64.96	72.24
Zm00001d010205_P002	Maize	cytosol	64.27	69.76
HORVU1Hr1G075150.4	Barley	plasma membrane	77.09	67.92
VIT_09s0002g09040.t01	Wine grape	cytosol	12.48	64.04
GSMUA_Achr7P23220_001	Banana	cytosol	53.5	62.6
KRG99105	Soybean	cytosol	14.87	58.78
Bra000675.1-P	Field mustard	cytosol	31.11	58.71
GSMUA_Achr6P18780_001	Banana	cytosol	58.12	58.62
CDX90715	Canola	cytosol	30.6	57.74
GSMUA_Achr5P25970_001	Banana	cytosol	54.02	56.94
GSMUA_Achr3P22170_001	Banana	cytosol	49.74	55.32
KRH23753	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	38.97	53.77
CDY58916	Canola	cytosol	12.48	52.9
VIT_07s0031g03220.t01	Wine grape	cytosol	47.01	52.68
KRH63933	Soybean	plasma membrane	49.06	51.53
KRH54012	Soybean	nucleus	48.72	51.17
VIT_18s0041g00430.t01	Wine grape	cytosol	52.31	50.49
KRH59683	Soybean	cytosol	46.32	50.28
PGSC0003DMT400065886	Potato	cytosol	41.03	48.88
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	52.14	48.8
Solyc11g027880.1.1	Tomato	cytosol, endoplasmic reticulum, plastid	40.68	48.57
KRH41016	Soybean	endoplasmic reticulum	47.01	47.83
CDY50441	Canola	plasma membrane	39.49	47.63
CDX82180	Canola	nucleus	39.49	47.24
CDY03654	Canola	nucleus	39.49	47.24
Bra008013.1-P	Field mustard	nucleus	39.83	46.98
AT1G72160.1	Thale cress	nucleus	39.32	46.94
Solyc11g051160.1.1	Tomato	extracellular, plastid	47.18	46.86
Os05t0345175-01	Rice	cytosol	6.32	46.84
Solyc06g064940.2.1	Tomato	nucleus	46.15	46.55
KRH44929	Soybean	endoplasmic reticulum	45.81	46.53
PGSC0003DMT400013297	Potato	cytosol	45.64	46.27
VIT_05s0029g01570.t01	Wine grape	cytosol	31.79	46.27
Bra003891.1-P	Field mustard	cytosol	39.83	46.23
KRH23751	Soybean	endoplasmic reticulum	47.86	46.2
CDX68278	Canola	cytosol	33.85	45.1
VIT_18s0041g00420.t01	Wine grape	cytosol	43.76	43.99
CDX68279	Canola	cytosol	39.66	43.69
Bra016084.1-P	Field mustard	cytosol	41.54	43.55
CDX96377	Canola	cytosol	41.2	43.35
Bra008012.1-P	Field mustard	cytosol	41.37	43.06
CDY03655	Canola	cytosol	41.03	42.48
Bra003892.1-P	Field mustard	cytosol	37.27	41.76
CDX82182	Canola	cytosol	40.51	41.22
AT1G72150.1	Thale cress	cytosol	39.83	40.66
CDY71835	Canola	cytosol	19.83	40.56
CDY71842	Canola	cytosol	32.31	39.29
Os05t0345100-00	Rice	plastid	20.85	39.1
Os06t0671800-01	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	22.91	36.91
AT1G22530.1	Thale cress	cytosol	41.71	35.72
Bra040854.1-P	Field mustard	cytosol	42.73	35.41
CDY21368	Canola	cytosol	38.97	34.97
CDY66581	Canola	cytosol	36.58	34.19
AT4G09160.1	Thale cress	cytosol	38.46	33.68
CDY05051	Canola	nucleus	38.12	32.13

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	EntrezGene:4324771	EntrezGene:4338870	ProteinID:AAV59419.1	EMBL:AK073077
ProteinID:BAB86220.1	ProteinID:BAB92436.1	ProteinID:BAD82082.1	ProteinID:BAF06872.1	ProteinID:BAF17531.1	ProteinID:BAS75487.1
ProteinID:BAS75488.1	ProteinID:BAS94143.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf
ncoils:Coil	InterPro:GOLD_dom	InterPro:GOLD_dom_sf	InterPro:IPR001251	InterPro:IPR009038	InterPro:IPR036865
EnsemblPlantsGene:Os05g0429400	EnsemblPlants:Os05t0429400-01	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PFscan:PS50866
PANTHER:PTHR23324	PANTHER:PTHR23324:SF143	UniProt:Q5TKJ2	SMART:SM00516	SMART:SM01100	SUPFAM:SSF101576
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI00003B0E92	RefSeq:XP_015621303.1	RefSeq:XP_015640237.1	SEG:seg

Description

Phosphatidylinositol transfer protein-like, N-terminal domain containing protein. (Os05t0429400-01)

Coordinates

chr5:-:21065449..21068343

Molecular Weight (calculated)

63951.1 Da

IEP (calculated)

4.273

GRAVY (calculated)

-0.457

Length

585 amino acids

Sequence
(BLAST)

001: MAEEAKQETP AAAEVVVVEK ADEVVAVEKA VEVEAEEKKL AEQEEEEEKK AEEAEEAAGG DEAAVIEGTG SFKEESNLVS ELPDPERTAL AQLKELVAAA
101: LAAGEFDLPP PPPPPPAKAE EPAKEEEPKA AEAPAAEEPK AEAEAEAEAA ATEEPKTEEP KTEEPAKEEE PKAAAAAAAE EPKAEAAAEE AKPAEPETEE
201: KTVVVTEDEG TSKTVEAIEE TVVVAAPAAA AEAEAAAPKE ELIWGVPLTG DDERTDTVLL KFLRAREFKV KEAMAMLKAA VLWRKRFGID AVLAADLGLP
301: ELENVVFYRG ADREGHPVCY NVYGEFQDKD LYEKAFGDEE KRERFLKWRI QLLERGILDQ LDFSPSGICS MVQVTDLKNS PPMLGKHRTV TRQALALLQD
401: NYPEFIAKKI FINVPWWYIA ANKMVSPFLT QRTKSKIIFC TAAKSAETLF RYIAPEQVPV QFGGLYKEDD TEFSTSDAVT ELPIKPSSKE TVEIPATENS
501: TVVWELRVLG WEVSYGAEFT PDAEGGYTVI VQKTRKVPAN EEPIMKGSFK VGEPGKIVLT VDNAASKKKK QLLYRFKVKS SSESA

Best Arabidopsis Sequence Match ( AT4G09160.1 )
(BLAST)

001: MSQDSATTTP PPPLTSDVSM PSGEEDEPKH VTSEEEAPVT SETNLKLPLM PELEESNHTA EVVSEKVTPE TMTLESEGLN HAAEDSEQTH EVTPETETAK
101: LEVLNHTAED SEQTHEVTPE KETVKSEFLN HVAEDSEQTH EVTPETETVK SEVLNHAAED SEQPRGVTPT PETETSEADT SLLVTSETEE PNHAAEDYSE
201: TEPSQKLMLE QRRKYMEVED WTEPELPDEA VLEAAASVPE PKQPEPQTPP PPPSTTTSTV ASRSLAEMMN REEAEVEEKQ KIQIPRSLGS FKEETNKISD
301: LSETELNALQ ELRHLLQVSQ DSSKTSIWGV PLLKDDRTDV VLLKFLRARD FKPQEAYSML NKTLQWRIDF NIEELLDENL GDDLDKVVFM QGQDKENHPV
401: CYNVYGEFQN KDLYQKTFSD EEKRERFLRW RIQFLEKSIR NLDFVAGGVS TICQVNDLKN SPGPGKTELR LATKQALHLL QDNYPEFVSK QIFINVPWWY
501: LAFYRIISPF MSQRSKSKLV FAGPSRSAET LLKYISPEHV PVQYGGLSVD NCECNSDFTH DDIATEITVK PTTKQTVEII VYEKCTIVWE IRVVGWEVSY
601: GAEFVPENKE GYTVIIQKPR KMTAKNELVV SHSFKVGEVG RILLTVDNPT STKKMLIYRF KVKPLACE

Arabidopsis Description

PATL5Patellin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.