Factsheet for VIT_07s0031g03220.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g09040.t01	Wine grape	cytosol	19.73	90.35
GSMUA_Achr2P08100_001	Banana	cytosol	52.3	68.77
KRH59683	Soybean	cytosol	65.13	63.08
KRH63933	Soybean	plasma membrane	67.24	63.02
HORVU3Hr1G082150.1	Barley	cytosol	41.0	62.21
Zm00001d005249_P001	Maize	mitochondrion	32.76	61.73
Zm00001d041705_P001	Maize	cytosol, mitochondrion	12.64	61.68
KRH54012	Soybean	nucleus	65.71	61.58
VIT_05s0029g01570.t01	Wine grape	cytosol	47.13	61.19
Zm00001d043169_P001	Maize	cytosol	24.33	60.19
KRH41016	Soybean	endoplasmic reticulum	66.28	60.17
Zm00001d005304_P001	Maize	mitochondrion	31.23	59.93
GSMUA_Achr9P08580_001	Banana	cytosol, plasma membrane	51.53	58.99
GSMUA_Achr7P23220_001	Banana	cytosol	56.13	58.6
VIT_18s0041g00420.t01	Wine grape	cytosol	63.41	56.87
GSMUA_Achr6P18780_001	Banana	cytosol	61.88	55.69
VIT_18s0041g00430.t01	Wine grape	cytosol	62.84	54.13
GSMUA_Achr6P07270_001	Banana	cytosol, nucleus, plastid	52.3	52.5
GSMUA_Achr3P22170_001	Banana	cytosol	52.3	51.9
GSMUA_Achr5P25970_001	Banana	cytosol	54.98	51.71
Zm00001d012254_P003	Maize	mitochondrion	52.11	48.92
Zm00001d042664_P001	Maize	plasma membrane	53.07	48.51
VIT_10s0003g05480.t01	Wine grape	cytosol	43.49	47.69
KXG33790	Sorghum	cytosol	53.45	47.29
Os05t0429400-01	Rice	plasma membrane	52.68	47.01
EES10230	Sorghum	cytosol	45.59	46.48
Os01t0874700-01	Rice	plasma membrane	54.41	46.33
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	54.79	45.76
TraesCS3A01G385300.1	Wheat	cytosol	50.57	45.67
TraesCS1A01G268500.1	Wheat	cytosol	53.26	45.57
TraesCS3D01G378300.1	Wheat	cytosol	51.15	45.49
TraesCS1B01G279200.1	Wheat	cytosol	53.07	45.41
TraesCS1D01G268600.1	Wheat	golgi	52.87	45.25
TraesCS3B01G417500.1	Wheat	golgi	50.0	45.16
VIT_01s0137g00470.t01	Wine grape	cytosol	13.22	45.1
OQU78068	Sorghum	cytosol	45.21	44.87
Zm00001d038262_P001	Maize	plasma membrane	52.68	44.35
VIT_08s0058g00640.t01	Wine grape	cytosol, mitochondrion, nucleus	36.97	42.98
HORVU1Hr1G075150.4	Barley	plasma membrane	52.49	41.27
VIT_07s0005g03430.t01	Wine grape	cytosol	35.44	41.2
HORVU3Hr1G082110.2	Barley	plastid	50.38	40.78
Zm00001d010205_P002	Maize	cytosol	41.38	40.07
VIT_19s0085g00280.t01	Wine grape	cytosol	39.85	36.88

Protein Annotations

EntrezGene:100259349	wikigene:100259349	Gene3D:3.40.525.10	MapMan:35.1	ProteinID:CCB47183	ProteinID:CCB47183.1
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	UniProt:F6H4J1	EMBL:FN595233
InterPro:GOLD_dom	InterPro:GOLD_dom_sf	InterPro:IPR001251	InterPro:IPR009038	InterPro:IPR036865	EntrezGene:LOC100259349
wikigene:LOC100259349	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191	PFscan:PS50866
PANTHER:PTHR23324	PANTHER:PTHR23324:SF139	SMART:SM00516	SMART:SM01100	SUPFAM:SSF101576	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI000210A367	ArrayExpress:VIT_07s0031g03220	EnsemblPlantsGene:VIT_07s0031g03220	EnsemblPlants:VIT_07s0031g03220.t01	unigene:Vvi.19309
RefSeq:XP_002271899	RefSeq:XP_002271899.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7:+:20107057..20109496

Molecular Weight (calculated)

58777.8 Da

IEP (calculated)

4.576

GRAVY (calculated)

-0.553

Length

522 amino acids

Sequence
(BLAST)

001: MEEAVKPPPT EEFVESDEKI PQSDSFKEES TRVSDLPETE KKALEELKQL VQDALNHHQF TALPPPPPPP KEEEQAPVEV EEKSPEEEKK PETTLPEMKD
101: ECQPQETVSV VAETVVVAEA VEEKVDDDGA KTVEAIEETI VAVVAPPAEQ PPPPPKEAEE AAAPPQDTKP EAANAAAPPP PPEEVFIWGI KLMEDERSDV
201: ILLKFLRARD FKVKEAFAMI KNTVQWRKEF GIDQLMDEEL GNDLEKVVFM HGFDKEGHPV CYNVYGGFQN KDLYQKTFSD EEKRQKFLRW RIQFLEKSIR
301: KLDFTPGGIS TIVQVNDLKN SPGPGKWELR QATKQALQLL QDNYPEFVAK QIFINVPWWY LAVNRMISPF LTQRTKSKFV FAGPSKSAET LFKYIAAEQV
401: PVKYGGLSKE GEFGTADAVT EITVKPATKQ TVEFPVNETC LLTWEVRVVG WEVSYGAEFV PSAEEGYTVI IQKARKMAGN EEPVVCNSFK IGEPGKVVIT
501: IDNPTSKKKK LLYRLKTKLS SD

Best Arabidopsis Sequence Match ( AT4G09160.1 )
(BLAST)

001: MSQDSATTTP PPPLTSDVSM PSGEEDEPKH VTSEEEAPVT SETNLKLPLM PELEESNHTA EVVSEKVTPE TMTLESEGLN HAAEDSEQTH EVTPETETAK
101: LEVLNHTAED SEQTHEVTPE KETVKSEFLN HVAEDSEQTH EVTPETETVK SEVLNHAAED SEQPRGVTPT PETETSEADT SLLVTSETEE PNHAAEDYSE
201: TEPSQKLMLE QRRKYMEVED WTEPELPDEA VLEAAASVPE PKQPEPQTPP PPPSTTTSTV ASRSLAEMMN REEAEVEEKQ KIQIPRSLGS FKEETNKISD
301: LSETELNALQ ELRHLLQVSQ DSSKTSIWGV PLLKDDRTDV VLLKFLRARD FKPQEAYSML NKTLQWRIDF NIEELLDENL GDDLDKVVFM QGQDKENHPV
401: CYNVYGEFQN KDLYQKTFSD EEKRERFLRW RIQFLEKSIR NLDFVAGGVS TICQVNDLKN SPGPGKTELR LATKQALHLL QDNYPEFVSK QIFINVPWWY
501: LAFYRIISPF MSQRSKSKLV FAGPSRSAET LLKYISPEHV PVQYGGLSVD NCECNSDFTH DDIATEITVK PTTKQTVEII VYEKCTIVWE IRVVGWEVSY
601: GAEFVPENKE GYTVIIQKPR KMTAKNELVV SHSFKVGEVG RILLTVDNPT STKKMLIYRF KVKPLACE

Arabidopsis Description

PATL5Patellin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.