Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G72160.1 | KXG22896 | AT3G54220.1 | 19228333 |
| AT1G72160.1 | OQU82754 | AT3G54220.1 | 19228333 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042664_P001 | Maize | plasma membrane | 84.77 | 76.01 |
| KXG33790 | Sorghum | cytosol | 86.72 | 75.25 |
| HORVU3Hr1G082150.1 | Barley | cytosol | 50.2 | 74.71 |
| Os01t0874700-01 | Rice | plasma membrane | 79.69 | 66.56 |
| TraesCS3B01G417500.1 | Wheat | golgi | 74.02 | 65.57 |
| TraesCS3A01G385300.1 | Wheat | cytosol | 74.02 | 65.57 |
| TraesCS3D01G378300.1 | Wheat | cytosol | 74.41 | 64.91 |
| VIT_09s0002g09040.t01 | Wine grape | cytosol | 14.06 | 63.16 |
| OQU78068 | Sorghum | cytosol | 60.55 | 58.94 |
| HORVU3Hr1G082110.2 | Barley | plastid | 73.63 | 58.45 |
| KRG99105 | Soybean | cytosol | 16.6 | 57.43 |
| GSMUA_Achr7P23220_001 | Banana | cytosol | 54.88 | 56.2 |
| GSMUA_Achr3P22170_001 | Banana | cytosol | 53.71 | 52.28 |
| GSMUA_Achr6P18780_001 | Banana | cytosol | 58.2 | 51.38 |
| Bra000675.1-P | Field mustard | cytosol | 30.86 | 50.97 |
| CDX90715 | Canola | cytosol | 30.47 | 50.32 |
| GSMUA_Achr5P25970_001 | Banana | cytosol | 53.71 | 49.55 |
| KRH23753 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 39.06 | 47.17 |
| VIT_07s0031g03220.t01 | Wine grape | cytosol | 46.48 | 45.59 |
| KRH63933 | Soybean | plasma membrane | 49.22 | 45.24 |
| KRH54012 | Soybean | nucleus | 49.02 | 45.06 |
| Solyc11g027880.1.1 | Tomato | cytosol, endoplasmic reticulum, plastid | 42.38 | 44.29 |
| PGSC0003DMT400065886 | Potato | cytosol | 42.38 | 44.2 |
| VIT_18s0041g00430.t01 | Wine grape | cytosol | 51.95 | 43.89 |
| KRH59683 | Soybean | cytosol | 46.09 | 43.78 |
| VIT_05s0029g01570.t01 | Wine grape | cytosol | 34.18 | 43.53 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, plastid | 52.54 | 43.04 |
| CDY50441 | Canola | plasma membrane | 39.84 | 42.06 |
| CDY03654 | Canola | nucleus | 40.04 | 41.92 |
| CDX82180 | Canola | nucleus | 40.04 | 41.92 |
| KRH41016 | Soybean | endoplasmic reticulum | 47.07 | 41.91 |
| Bra008013.1-P | Field mustard | nucleus | 40.43 | 41.73 |
| Solyc06g064940.2.1 | Tomato | nucleus | 47.27 | 41.72 |
| PGSC0003DMT400013297 | Potato | cytosol | 46.68 | 41.42 |
| Bra003891.1-P | Field mustard | cytosol | 40.62 | 41.27 |
| AT1G72160.1 | Thale cress | nucleus | 39.45 | 41.22 |
| Solyc11g051160.1.1 | Tomato | extracellular, plastid | 47.27 | 41.09 |
| KRH44929 | Soybean | endoplasmic reticulum | 45.9 | 40.8 |
| KRH23751 | Soybean | endoplasmic reticulum | 47.85 | 40.43 |
| CDY71835 | Canola | cytosol | 22.46 | 40.21 |
| VIT_18s0041g00420.t01 | Wine grape | cytosol | 45.7 | 40.21 |
| CDY71842 | Canola | cytosol | 37.11 | 39.5 |
| EES18028 | Sorghum | plastid | 33.2 | 39.44 |
| CDX68278 | Canola | cytosol | 33.79 | 39.41 |
| Bra003892.1-P | Field mustard | cytosol | 38.87 | 38.12 |
| Bra016084.1-P | Field mustard | cytosol | 41.41 | 37.99 |
| CDX96377 | Canola | cytosol | 41.21 | 37.95 |
| CDY58916 | Canola | cytosol | 10.16 | 37.68 |
| Bra008012.1-P | Field mustard | cytosol | 41.21 | 37.54 |
| CDX68279 | Canola | cytosol | 38.87 | 37.48 |
| AT1G72150.1 | Thale cress | cytosol | 41.8 | 37.35 |
| CDY03655 | Canola | cytosol | 41.02 | 37.17 |
| CDX82182 | Canola | cytosol | 40.43 | 36.0 |
| EER88801 | Sorghum | cytosol | 36.33 | 35.63 |
| CDY66581 | Canola | cytosol | 38.67 | 31.63 |
| AT1G22530.1 | Thale cress | cytosol | 40.43 | 30.31 |
| AT4G09160.1 | Thale cress | cytosol | 39.26 | 30.09 |
| Bra040854.1-P | Field mustard | cytosol | 41.21 | 29.89 |
| CDY21368 | Canola | cytosol | 37.89 | 29.75 |
| CDY05051 | Canola | nucleus | 38.67 | 28.53 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.1 | UniProt:C5Y7V0 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | EnsemblPlants:EES10230 | ProteinID:EES10230 | ProteinID:EES10230.1 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0008150 | InterPro:IPR001251 |
| InterPro:IPR036865 | PFAM:PF00650 | PFAM:PF03765 | PRINTS:PR00180 | PFscan:PS50191 | PANTHER:PTHR23324 |
| PANTHER:PTHR23324:SF143 | SMART:SM00516 | SMART:SM01100 | EnsemblPlantsGene:SORBI_3005G211000 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| UniParc:UPI0001A86CB2 | RefSeq:XP_002451242.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:69746002..69752972
Molecular Weight (calculated)
56546.2 Da
IEP (calculated)
4.158
GRAVY (calculated)
-0.426
Length
512 amino acids
Sequence
(BLAST)
(BLAST)
001: MTEELQPESA GAELVVTEAA LVEAEVPAAA KAEAEAEAEK TADEAAVTAD DSGEETGSFK EESNLVDDLP DPQKQQALDE FKQLIAAALA AGEFNLPPPL
101: PPPKAKEEPN AEETKTEEPK NEEPAKEEPK AEAEAADAPV DEVKTEVPPA EEAKAETVAE EAKPSEPEAQ EKTVVFAVEE IEETVVSAAA AATSEEAAAP
201: EVVAETQAAA PEPVLIWGVP LVGDDERTDT VLLKFLRARE FKVKEAMAML KSTVLWRERF GITSLLDDDL GLPELENVVF YRGTDREGHP VCYNVYGEFQ
301: DKDLYERTFG DDEKRERFLK WRIQLLERGI LSKLDFSPGG ICSMVQVTDL KNSPPMLRKH RSVTRQAVAL LQDNYPEFIA KKVFINVPWW YFAANKMMSP
401: FLTQRTKSKF VFATPAKSAE TLLRYIAPEQ VPVQFGGLFK ENDPEFTTSD TVTELTVEPS SKETIEIPVT ENSTITWELQ VLGWEVSYGA EFTPDTVGGY
501: AVIVQKTRKV RS
101: PPPKAKEEPN AEETKTEEPK NEEPAKEEPK AEAEAADAPV DEVKTEVPPA EEAKAETVAE EAKPSEPEAQ EKTVVFAVEE IEETVVSAAA AATSEEAAAP
201: EVVAETQAAA PEPVLIWGVP LVGDDERTDT VLLKFLRARE FKVKEAMAML KSTVLWRERF GITSLLDDDL GLPELENVVF YRGTDREGHP VCYNVYGEFQ
301: DKDLYERTFG DDEKRERFLK WRIQLLERGI LSKLDFSPGG ICSMVQVTDL KNSPPMLRKH RSVTRQAVAL LQDNYPEFIA KKVFINVPWW YFAANKMMSP
401: FLTQRTKSKF VFATPAKSAE TLLRYIAPEQ VPVQFGGLFK ENDPEFTTSD TVTELTVEPS SKETIEIPVT ENSTITWELQ VLGWEVSYGA EFTPDTVGGY
501: AVIVQKTRKV RS
001: MSQDSATTTP PPPLTSDVSM PSGEEDEPKH VTSEEEAPVT SETNLKLPLM PELEESNHTA EVVSEKVTPE TMTLESEGLN HAAEDSEQTH EVTPETETAK
101: LEVLNHTAED SEQTHEVTPE KETVKSEFLN HVAEDSEQTH EVTPETETVK SEVLNHAAED SEQPRGVTPT PETETSEADT SLLVTSETEE PNHAAEDYSE
201: TEPSQKLMLE QRRKYMEVED WTEPELPDEA VLEAAASVPE PKQPEPQTPP PPPSTTTSTV ASRSLAEMMN REEAEVEEKQ KIQIPRSLGS FKEETNKISD
301: LSETELNALQ ELRHLLQVSQ DSSKTSIWGV PLLKDDRTDV VLLKFLRARD FKPQEAYSML NKTLQWRIDF NIEELLDENL GDDLDKVVFM QGQDKENHPV
401: CYNVYGEFQN KDLYQKTFSD EEKRERFLRW RIQFLEKSIR NLDFVAGGVS TICQVNDLKN SPGPGKTELR LATKQALHLL QDNYPEFVSK QIFINVPWWY
501: LAFYRIISPF MSQRSKSKLV FAGPSRSAET LLKYISPEHV PVQYGGLSVD NCECNSDFTH DDIATEITVK PTTKQTVEII VYEKCTIVWE IRVVGWEVSY
601: GAEFVPENKE GYTVIIQKPR KMTAKNELVV SHSFKVGEVG RILLTVDNPT STKKMLIYRF KVKPLACE
101: LEVLNHTAED SEQTHEVTPE KETVKSEFLN HVAEDSEQTH EVTPETETVK SEVLNHAAED SEQPRGVTPT PETETSEADT SLLVTSETEE PNHAAEDYSE
201: TEPSQKLMLE QRRKYMEVED WTEPELPDEA VLEAAASVPE PKQPEPQTPP PPPSTTTSTV ASRSLAEMMN REEAEVEEKQ KIQIPRSLGS FKEETNKISD
301: LSETELNALQ ELRHLLQVSQ DSSKTSIWGV PLLKDDRTDV VLLKFLRARD FKPQEAYSML NKTLQWRIDF NIEELLDENL GDDLDKVVFM QGQDKENHPV
401: CYNVYGEFQN KDLYQKTFSD EEKRERFLRW RIQFLEKSIR NLDFVAGGVS TICQVNDLKN SPGPGKTELR LATKQALHLL QDNYPEFVSK QIFINVPWWY
501: LAFYRIISPF MSQRSKSKLV FAGPSRSAET LLKYISPEHV PVQYGGLSVD NCECNSDFTH DDIATEITVK PTTKQTVEII VYEKCTIVWE IRVVGWEVSY
601: GAEFVPENKE GYTVIIQKPR KMTAKNELVV SHSFKVGEVG RILLTVDNPT STKKMLIYRF KVKPLACE
Arabidopsis Description
PATL5Patellin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.