CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041705_P001	Maize	cytosol, mitochondrion	33.33	42.99
CDX68279	Canola	cytosol	97.83	25.42
CDX90715	Canola	cytosol	52.17	23.23
Zm00001d005249_P001	Maize	mitochondrion	44.2	22.02
CDX96377	Canola	cytosol	88.41	21.94
Zm00001d005304_P001	Maize	mitochondrion	41.3	20.96
CDY03655	Canola	cytosol	84.06	20.53
GSMUA_Achr2P08100_001	Banana	cytosol	58.7	20.4
AT1G72150.1	Thale cress	cytosol	84.06	20.24
CDX82182	Canola	cytosol	84.06	20.17
HORVU3Hr1G082150.1	Barley	cytosol	45.65	18.31
GSMUA_Achr9P08580_001	Banana	cytosol, plasma membrane	55.07	16.67
CDX68278	Canola	cytosol	51.45	16.17
GSMUA_Achr7P23220_001	Banana	cytosol	56.52	15.6
CDX82180	Canola	nucleus	52.17	14.72
CDY03654	Canola	nucleus	52.17	14.72
CDY50441	Canola	plasma membrane	51.45	14.64
GSMUA_Achr5P25970_001	Banana	cytosol	57.97	14.41
GSMUA_Achr3P22170_001	Banana	cytosol	52.9	13.88
VIT_18s0041g00430.t01	Wine grape	cytosol	60.87	13.86
KRH44929	Soybean	endoplasmic reticulum	57.25	13.72
GSMUA_Achr6P18780_001	Banana	cytosol	57.25	13.62
Zm00001d012254_P003	Maize	mitochondrion	53.62	13.31
Zm00001d043169_P001	Maize	cytosol	20.29	13.27
GSMUA_Achr6P07270_001	Banana	cytosol, nucleus, plastid	50.0	13.27
KRH23751	Soybean	endoplasmic reticulum	56.52	12.87
CDY02316	Canola	cytosol	39.86	12.76
OQU78068	Sorghum	cytosol	48.55	12.74
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	57.25	12.64
Os05t0429400-01	Rice	plasma membrane	52.9	12.48
KXG33790	Sorghum	cytosol	52.9	12.37
PGSC0003DMT400013297	Potato	cytosol	50.72	12.13
Zm00001d042664_P001	Maize	plasma membrane	50.0	12.08
Solyc06g064940.2.1	Tomato	nucleus	50.72	12.07
CDY21368	Canola	cytosol	55.8	11.81
Os01t0874700-01	Rice	plasma membrane	52.17	11.75
TraesCS3B01G417500.1	Wheat	golgi	48.55	11.59
Solyc11g051160.1.1	Tomato	extracellular, plastid	49.28	11.54
TraesCS1D01G268600.1	Wheat	golgi	50.72	11.48
TraesCS1B01G279200.1	Wheat	cytosol	50.72	11.48
CDX90637	Canola	cytosol	33.33	11.44
TraesCS3A01G385300.1	Wheat	cytosol	47.83	11.42
TraesCS3D01G378300.1	Wheat	cytosol	48.55	11.41
CDX78026	Canola	cytosol, plastid	34.06	11.41
TraesCS1A01G268500.1	Wheat	cytosol	50.0	11.31
Zm00001d038262_P001	Maize	plasma membrane	50.72	11.29
CDY09549	Canola	nucleus	43.48	11.21
CDX73705	Canola	cytosol, plastid	33.33	11.16
Zm00001d010205_P002	Maize	cytosol	42.75	10.95
CDY71842	Canola	cytosol	37.68	10.81
CDY50723	Canola	nucleus	41.3	10.75
CDX77578	Canola	cytosol	41.3	10.71
HORVU1Hr1G075150.4	Barley	plasma membrane	51.45	10.69
CDY05051	Canola	nucleus	52.17	10.37
HORVU3Hr1G082110.2	Barley	plastid	47.83	10.23
EES10230	Sorghum	cytosol	37.68	10.16
CDY66581	Canola	cytosol	42.03	9.27
CDY29036	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	34.06	7.89
KRG99105	Soybean	cytosol	7.97	7.43
CDY71835	Canola	cytosol	3.62	1.75
CDX78958	Canola	cytosol, plastid	2.17	1.08
CDY13832	Canola	cytosol, plastid	2.17	1.08
CDY29572	Canola	cytosol, plastid	2.17	1.08
CDX73635	Canola	cytosol, plastid	2.17	1.08

Protein Annotations

EnsemblPlants:CDY58916	EnsemblPlantsGene:GSBRNA2T00025320001	PANTHER:PTHR23324	PANTHER:PTHR23324:SF96	ProteinID:CDY58916	ProteinID:CDY58916.1
UniParc:UPI0004EDD51D	UniProt:A0A078J6Q1	MapMan:35.1	:	:	:

Description

BnaCnng33910DBnaCnng33910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6Q1]

Coordinates

chrLK033711:-:10214..11145

Molecular Weight (calculated)

15032.1 Da

IEP (calculated)

6.744

GRAVY (calculated)

-0.151

Length

138 amino acids

Sequence
(BLAST)

001: MVLAGPSKSA DAIFKYISPE QVPVKYGGLS KDIPISTEDT VTEAIVKPAA KYTIDLPASD ACMLSWELRV LGADVSYGAQ FEPTTEGSYA VIVSKNRRIE
101: STDEPVITES FKVGEPGKIT SKKKKVLYRF KTLPISDL

Best Arabidopsis Sequence Match ( AT1G22530.1 )
(BLAST)

001: MAQEEIQKPT ASVPVVKEET PAPVKEVEVP VTTEKAVAAP APEATEEKVV SEVAVPETEV TAVKEEEVAT GKEILQSESF KEEGYLASEL QEAEKNALAE
101: LKELVREALN KREFTAPPPP PAPVKEEKVE EKKTEETEEK KEEVKTEEKS LEAETKEEEK SAAPATVETK KEEILAAPAP IVAETKKEET PVAPAPVETK
201: PAAPVVAETK KEEILPAAPV TTETKVEEKV VPVETTPAAP VTTETKEEEK AAPVTTETKE EEKAAPGETK KEEKATASTQ VKRASKFIKD IFVSVTTSEK
301: KKEEEKPAVV TIEKAFAADQ EEETKTVEAV EESIVSITLP ETAAYVEPEE VSIWGIPLLE DERSDVILLK FLRARDFKVK EAFTMLKNTV QWRKENKIDD
401: LVSEDLEGSE FEKLVFTHGV DKQGHVVIYS SYGEFQNKEI FSDKEKLSKF LKWRIQFQEK CVRSLDFSPE AKSSFVFVSD FRNAPGLGQR ALWQFIKRAV
501: KQFEDNYPEF VAKELFINVP WWYIPYYKTF GSIITSPRTR SKMVLSGPSK SAETIFKYVA PEVVPVKYGG LSKDSPFTVE DGVTEAVVKS TSKYTIDLPA
601: TEGSTLSWEL RVLGADVSYG AQFEPSNEAS YTVIVSKNRK VGLTDEPVIT DSFKASEAGK VVITIDNQTF KKKKVLYRSK TQA

Arabidopsis Description

PATL2Patellin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q56ZI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.