CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023118.1-P	Field mustard	cytosol	100.0	87.78
CDY09549	Canola	nucleus	90.95	73.27
CDX77578	Canola	cytosol	85.61	69.36
CDY50723	Canola	nucleus	80.05	65.09
AT1G30690.2	Thale cress	cytosol	75.87	60.56
VIT_10s0003g05480.t01	Wine grape	cytosol	59.4	53.78
KRH11846	Soybean	cytosol	57.77	53.55
KRH36854	Soybean	cytosol	56.61	52.25
Solyc02g070210.2.1	Tomato	cytosol	51.97	47.56
PGSC0003DMT400054383	Potato	cytosol	51.04	46.81
CDX90715	Canola	cytosol	32.48	45.16
GSMUA_Achr9P30580_001	Banana	cytosol	54.29	43.01
Zm00001d046995_P001	Maize	plasma membrane	50.35	41.02
EER88801	Sorghum	cytosol	49.19	40.61
CDY58916	Canola	cytosol	12.76	39.86
HORVU7Hr1G107070.1	Barley	cytosol	48.03	38.26
CDX78026	Canola	cytosol, plastid	36.19	37.86
CDX73705	Canola	cytosol, plastid	35.73	37.38
CDY13832	Canola	cytosol, plastid	23.43	36.46
CDX73635	Canola	cytosol, plastid	23.43	36.46
CDY29572	Canola	cytosol, plastid	23.43	36.46
CDX78958	Canola	cytosol, plastid	23.43	36.46
TraesCS7A01G466800.1	Wheat	cytosol	46.87	36.4
TraesCS7B01G368100.1	Wheat	nucleus	47.56	36.22
TraesCS7D01G454600.1	Wheat	cytosol	47.56	35.84
CDX90637	Canola	cytosol	33.18	35.57
CDX82180	Canola	nucleus	39.91	35.17
CDY03654	Canola	nucleus	39.91	35.17
CDY50441	Canola	plasma membrane	39.44	35.05
CDX68278	Canola	cytosol	33.64	33.03
Os06t0671800-01	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	27.61	32.78
CDX68279	Canola	cytosol	34.11	27.68
CDX96377	Canola	cytosol	35.5	27.52
CDY71835	Canola	cytosol	18.1	27.27
CDY03655	Canola	cytosol	35.03	26.73
CDX82182	Canola	cytosol	34.8	26.09
CDY05051	Canola	nucleus	38.28	23.78
CDY71842	Canola	cytosol	26.45	23.7
CDY29036	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	32.71	23.66
CDY21368	Canola	cytosol	31.55	20.86
CDY66581	Canola	cytosol	29.23	20.13

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	GO:A0A078EM71	EnsemblPlants:CDY02316	ProteinID:CDY02316	ProteinID:CDY02316.1
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:GOLD_dom	EnsemblPlantsGene:GSBRNA2T00113784001
InterPro:IPR001251	InterPro:IPR009038	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191
PFscan:PS50866	PANTHER:PTHR23324	PANTHER:PTHR23324:SF96	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI0004EDEE90	SEG:seg	:	:	:

Description

BnaA09g25860D

Coordinates

chrLK031933:+:402429..404474

Molecular Weight (calculated)

48478.5 Da

IEP (calculated)

4.602

GRAVY (calculated)

-0.420

Length

431 amino acids

Sequence
(BLAST)

001: MTAEVKVEEK QVESAVVIAS VEEETTVKVV VEEEKETKVE KKKSEAIVTE EEAKAETSEP AVVAEDSPKE EAKTDANAET IEKESPEEEV KAETVDNDIE
101: LWGVPLLPSK GAEGTDVILM KFLRARDFKV NEAFEMLKKT LKWRKEHKID SILGEDFGED LASAAYMNGL DLESRPVCYN IYSVFGNEEL YQSRENLLRW
201: RFQLMEKGIQ KLDLKPGGVT SLLQIHDLKN CPGLYKKELW VAIKNAIVAL QDNYPELVFI NVPFLFYAGS TLLSPFLTQR TKSKFVVTRP ANVTETLLNY
301: IPAEEIPVQY GGFKRYDDTE FSNEAVSEVV VKPGSSETIE IPAAETEGTL VWDIAVLGWE VSYKEEFVPA NEGAYTIIVQ KGKKIGSNEG PLRNSFKNSE
401: SGKIVLTVDN VSSKKKKRVL YRYRNKTESS C

Best Arabidopsis Sequence Match ( AT1G30690.2 )
(BLAST)

001: MTAEVKVEEK QVESEVVIAP AVVPEETTVK AVVEETKVEE DESKPEGVEK SASFKEESDF FADLKESEKK ALSDLKSKLE EAIVDNTLLK TKKKESSPMK
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS

Arabidopsis Description

PATL4Patellin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q94C59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.