Factsheet for TraesCS7B01G368100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G454600.1	Wheat	cytosol	94.7	93.71
TraesCS7A01G466800.1	Wheat	cytosol	90.11	91.89
HORVU7Hr1G107070.1	Barley	cytosol	85.87	89.83
EER88801	Sorghum	cytosol	65.9	71.46
Zm00001d046995_P001	Maize	plasma membrane	65.02	69.57
Os06t0671800-01	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	42.58	66.39
VIT_10s0003g05480.t01	Wine grape	cytosol	44.35	52.73
KRH11846	Soybean	cytosol	41.7	50.75
KRH36854	Soybean	cytosol	41.87	50.75
GSMUA_Achr9P30580_001	Banana	cytosol	48.06	50.0
Solyc02g070210.2.1	Tomato	cytosol	41.34	49.68
PGSC0003DMT400054383	Potato	cytosol	40.99	49.36
CDX77578	Canola	cytosol	44.88	47.74
CDY02316	Canola	cytosol	36.22	47.56
Bra026229.1-P	Field mustard	cytosol	44.7	47.56
CDY50723	Canola	nucleus	43.82	46.79
Bra023118.1-P	Field mustard	cytosol	40.46	46.64
AT1G30690.2	Thale cress	cytosol	43.82	45.93
CDY09549	Canola	nucleus	43.11	45.61
VIT_19s0085g00280.t01	Wine grape	cytosol	42.76	42.91
TraesCS1B01G213900.1	Wheat	plastid	30.39	40.66
TraesCS3B01G417500.1	Wheat	golgi	37.28	36.51
TraesCS1B01G279200.1	Wheat	cytosol	36.75	34.1

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf
ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0005886	GO:GO:0016020	InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650
PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF96	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	EnsemblPlantsGene:TraesCS7B01G368100	EnsemblPlants:TraesCS7B01G368100.1	TIGR:cd00170	SEG:seg

Description

No Description!

Coordinates

chr7B:-:632660026..632661822

Molecular Weight (calculated)

61616.9 Da

IEP (calculated)

5.011

GRAVY (calculated)

-0.484

Length

566 amino acids

Sequence
(BLAST)

001: MGVEVVSGGA VEAVAPAKEV GAKVEVEAGA AAVAVAKNMS FREESNRLGD LKDAERKALA ELRAKVEEAI VEGKLFDFDD GSSKVKVKVE AKKKEGKKKE
101: GKKKKKAEAA EEKKEEAAAD EKKPEVAAEE KKEEAVAEEK VEAGEEKKEE EAKEEVAEPA GEKKEEAVAA EEKQEEAAEE KKEPEAEAAA EKEETAAVEA
201: EKAAPAVAVD KDVALWGVPL LPSKGDEATD VVLLKFLRAR DFKAGAAFDM LRRTLRWRRE WKSLAATAAD GDDFEGDALP EGACRLDGAD REGHPVCYNA
301: LGVFADEAVY RSALGTDGGK KPARFLRWRV RAMERHVAEL DFRPGGAASL LQVTDLRGSP GPARKDLRVA MKQVLDLFQD NYPELVARNI LINVPFSYYA
401: FTTVFFPFLT QRTKSKLVVA RPSKVTETLL KYIPIEAIPV KYGGLKRDGD AEFTGEHDAE IAEVVVKAGA TEAIEIEAAE GDTTLTWDVT VLGWEVRYTE
501: EFVPADEGAY TIVVSKGRKV GAGEEAVRNS FRAAEAGKVV ITVENATRGR KRVLFRHKAK SALAKK

Best Arabidopsis Sequence Match ( AT1G30690.2 )
(BLAST)

001: MTAEVKVEEK QVESEVVIAP AVVPEETTVK AVVEETKVEE DESKPEGVEK SASFKEESDF FADLKESEKK ALSDLKSKLE EAIVDNTLLK TKKKESSPMK
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS

Arabidopsis Description

PATL4Patellin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q94C59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.