CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11846	Soybean	cytosol	92.93	93.33
VIT_10s0003g05480.t01	Wine grape	cytosol	66.81	65.55
Solyc02g070210.2.1	Tomato	cytosol	63.17	62.63
PGSC0003DMT400054383	Potato	cytosol	62.74	62.34
Bra023118.1-P	Field mustard	cytosol	59.74	56.82
CDY02316	Canola	cytosol	52.25	56.61
CDX77578	Canola	cytosol	62.31	54.7
Bra026229.1-P	Field mustard	cytosol	62.1	54.51
CDY50723	Canola	nucleus	61.67	54.34
CDY09549	Canola	nucleus	61.46	53.64
AT1G30690.2	Thale cress	cytosol	61.46	53.15
GSMUA_Achr9P30580_001	Banana	cytosol	59.74	51.29
KRG99105	Soybean	cytosol	16.06	50.68
EER88801	Sorghum	cytosol	55.03	49.23
Zm00001d046995_P001	Maize	plasma membrane	54.82	48.39
KRH76050	Soybean	cytosol	41.11	45.61
KRH65546	Soybean	cytosol	40.47	44.89
HORVU7Hr1G107070.1	Barley	cytosol	51.61	44.55
KRH23753	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	39.61	43.63
KRH00348	Soybean	cytosol	40.47	43.45
TraesCS7A01G466800.1	Wheat	cytosol	50.75	42.7
TraesCS7B01G368100.1	Wheat	nucleus	50.75	41.87
TraesCS7D01G454600.1	Wheat	cytosol	50.96	41.61
KRH63933	Soybean	plasma membrane	49.04	41.11
KRH59683	Soybean	cytosol	46.9	40.63
KRH54012	Soybean	nucleus	48.39	40.57
Os06t0671800-01	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	31.48	40.5
KRH41016	Soybean	endoplasmic reticulum	46.9	38.09
KRH19560	Soybean	cytosol	38.33	38.09
KRH32187	Soybean	cytosol	38.12	37.71
KRH44929	Soybean	endoplasmic reticulum	45.4	36.81
KRH23751	Soybean	endoplasmic reticulum	45.82	35.31

Protein Annotations

EntrezGene:100809450	Gene3D:3.40.525.10	MapMan:35.1	EMBL:ACUP02005398	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_09G028400	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:GOLD_dom	UniProt:I1L0J1	InterPro:IPR001251
InterPro:IPR009038	InterPro:IPR036865	EnsemblPlants:KRH36854	ProteinID:KRH36854	ProteinID:KRH36854.1	PFAM:PF00650
PFAM:PF03765	PFscan:PS50191	PFscan:PS50866	PANTHER:PTHR23324	PANTHER:PTHR23324:SF139	SMART:SM00516
SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000233C31E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:2330843..2333207

Molecular Weight (calculated)

52981.7 Da

IEP (calculated)

4.820

GRAVY (calculated)

-0.601

Length

467 amino acids

Sequence
(BLAST)

001: MTAEVMAQEE TQAAEVVVVA VAEPQKEKDA EENVEPREPS SVDETKPKTV EKSSSYKEES NYLSDLKEFE RKALSELKSK LEEAILGNTL FDPKKEALPE
101: NEEKKNEGEE KEEEEEKKVE VEENDVSIWG VTLLPSKGAE GVDVVLLKFL RAREFKVNDA FEMLKKTLKW RKESKIDSVV DEDFGSDLAS AAYMNGVDHE
201: GHPVCYNIFG AFESEESYQK TFGTEEKRSE FLRWRCQLME KGIQRLNLKP GGVSSLLQIN DLKNSPGPSK LRVATKQTLA MFQDNYPEMV AKNIFINVPF
301: WYYALNALLS PFLTQRTKSK FVVARPNKVT ETLTKYIPIE EIPVHYGGFK RENDSEFSSQ DVAVSELILK AGSTATIEIP ALEVGYSLCW DLTVLGWELS
401: YKEEFVPTDE GSYTVIVQKG KKMGSQEGPV RNTFRNNEPG KVVLTIENTS NKKKKVLYRY KSIKSSF

Best Arabidopsis Sequence Match ( AT1G30690.2 )
(BLAST)

001: MTAEVKVEEK QVESEVVIAP AVVPEETTVK AVVEETKVEE DESKPEGVEK SASFKEESDF FADLKESEKK ALSDLKSKLE EAIVDNTLLK TKKKESSPMK
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS

Arabidopsis Description

PATL4Patellin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q94C59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.