CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046995_P001	Maize	plasma membrane	88.31	87.15
Os06t0671800-01	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	48.85	70.25
HORVU7Hr1G107070.1	Barley	cytosol	70.5	68.02
TraesCS7A01G466800.1	Wheat	cytosol	71.46	67.21
TraesCS7B01G368100.1	Wheat	nucleus	71.46	65.9
TraesCS7D01G454600.1	Wheat	cytosol	71.84	65.56
VIT_10s0003g05480.t01	Wine grape	cytosol	50.96	55.88
KRH36854	Soybean	cytosol	49.23	55.03
KRH11846	Soybean	cytosol	48.66	54.62
GSMUA_Achr9P30580_001	Banana	cytosol	55.17	52.94
Solyc02g070210.2.1	Tomato	cytosol	47.7	52.87
PGSC0003DMT400054383	Potato	cytosol	46.74	51.91
CDY02316	Canola	cytosol	40.61	49.19
Bra023118.1-P	Field mustard	cytosol	45.59	48.47
CDX77578	Canola	cytosol	48.85	47.93
CDY50723	Canola	nucleus	48.66	47.92
Bra026229.1-P	Field mustard	cytosol	48.66	47.74
CDY09549	Canola	nucleus	48.47	47.29
AT1G30690.2	Thale cress	cytosol	48.47	46.85
VIT_19s0085g00280.t01	Wine grape	cytosol	46.74	43.26
EES18028	Sorghum	plastid	35.44	42.92
EES10230	Sorghum	cytosol	35.63	36.33
KXG33790	Sorghum	cytosol	39.85	35.25
OQU78068	Sorghum	cytosol	34.48	34.22

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	EntrezGene:8061600	UniProt:C5Z7R9	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	EnsemblPlants:EER88801	ProteinID:EER88801	ProteinID:EER88801.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	InterPro:GOLD_dom	InterPro:IPR001251	InterPro:IPR009038	InterPro:IPR036865	PFAM:PF00650
PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191	PFscan:PS50866	PANTHER:PTHR23324	PANTHER:PTHR23324:SF82
SMART:SM00516	SMART:SM01100	EnsemblPlantsGene:SORBI_3010G224800	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0001A88F4F
RefSeq:XP_002437434.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:56687722..56689902

Molecular Weight (calculated)

57698.0 Da

IEP (calculated)

4.821

GRAVY (calculated)

-0.574

Length

522 amino acids

Sequence
(BLAST)

001: MAVEAVSGNG GEAAAPAPAK EVSAKEVVAV SKNASFREES NFLDDLKESE RKALADLRDK VEAAIVEGKL FDDGKPEVVK EKEEAKKKAV EKKEEEPETE
101: AKVEEDGKKE ADVEEEKKEG EEEGEKKEAE EESGEDTKEE AKKEEAAEKA AAKEEEEKPA ETTTAAVVVV HKDIALWGVP LLPSKGDEAT DVVLLKFLRA
201: RDFKAGAAFE MLRRTLRWRR DWAGFSADAD ADLPEELAGA CYLDGADREG HPVCYNALGV FADDAVYKKA LGTEEGKARF LRWRVRAMER HVAELDLRPG
301: GAASLLQVTD LKNSPGPAKK DLRVAVKQVL DLFQDNYPEL VARNILINVP FWYYAFSALF YPFLTQRTKS KFVVARPSKV TETLLKYIPI EAIPVKYGGL
401: KRDGDTEFSA DDGESVTEVT VKGSSTQTIE IEAIEGDATL TWDLTVLGWE VNYKEEFVPA DEGSYTIIIR KGKKMGTGEE AVRNSFRAGE PGKVVLTVEN
501: TSHRKKKVLF RHKAKSACAK KC

Best Arabidopsis Sequence Match ( AT1G30690.2 )
(BLAST)

001: MTAEVKVEEK QVESEVVIAP AVVPEETTVK AVVEETKVEE DESKPEGVEK SASFKEESDF FADLKESEKK ALSDLKSKLE EAIVDNTLLK TKKKESSPMK
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS

Arabidopsis Description

PATL4Patellin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q94C59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.