Factsheet for HORVU7Hr1G107070.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
MultiLoc:	nucleus
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G466800.1	Wheat	cytosol	90.39	88.11
TraesCS7B01G368100.1	Wheat	nucleus	89.83	85.87
TraesCS7D01G454600.1	Wheat	cytosol	87.99	83.22
EER88801	Sorghum	cytosol	68.02	70.5
Zm00001d046995_P001	Maize	plasma membrane	67.47	69.0
Os06t0671800-01	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	43.99	65.56
VIT_10s0003g05480.t01	Wine grape	cytosol	47.32	53.78
KRH11846	Soybean	cytosol	44.55	51.83
KRH36854	Soybean	cytosol	44.55	51.61
GSMUA_Achr9P30580_001	Banana	cytosol	50.65	50.37
Solyc02g070210.2.1	Tomato	cytosol	42.51	48.83
PGSC0003DMT400054383	Potato	cytosol	42.14	48.51
CDY02316	Canola	cytosol	38.26	48.03
HORVU3Hr1G082150.1	Barley	cytosol	29.57	46.51
Bra023118.1-P	Field mustard	cytosol	42.14	46.44
CDX77578	Canola	cytosol	45.47	46.24
Bra026229.1-P	Field mustard	cytosol	45.29	46.05
AT1G30690.2	Thale cress	cytosol	45.29	45.37
CDY50723	Canola	nucleus	44.36	45.28
CDY09549	Canola	nucleus	44.18	44.67
VIT_19s0085g00280.t01	Wine grape	cytosol	43.99	42.2
HORVU3Hr1G082110.2	Barley	plastid	37.52	31.47
HORVU1Hr1G075150.4	Barley	plasma membrane	38.45	31.33
HORVU1Hr1G051510.3	Barley	plastid	17.93	20.73

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A287XPX3	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0016020	EnsemblPlantsGene:HORVU7Hr1G107070	EnsemblPlants:HORVU7Hr1G107070.1
InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324
PANTHER:PTHR23324:SF139	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000B476BC8
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:621834268..621836374

Molecular Weight (calculated)

59081.1 Da

IEP (calculated)

4.869

GRAVY (calculated)

-0.404

Length

541 amino acids

Sequence
(BLAST)

001: MGVEVVSGGA VEAVAAAPAK VEVEAGAAAV VAKNMSFREE SNRLGDLKDH ERKALAELRA MVEEAVVDGK LFDLEDGSGK VKVKVEAKKK EGKKKKKAVE
101: KKPVAAAEEK EEEAVAEEKK EEAEEAKKED VSAPAVEKKE EEAKEEEAVV EEEKKEEAVA EEEKKEETAA AEEEGEKAVA VVVDKDVALW GVPLLPSKGD
201: EATDVVLLKF LRARDFKAGA AFEMLRRTLR WRREWKSLAA TAADGDDEDD ALPEGACYLD GADREGHPVC YNALGVFADE AVYKSALGTD GGKKPARFLR
301: WRVRAMERHV AELDFTPGGV ASLLQVTDLR GSPGPAKKDL RVAMKQVLDL FQDNYPELVA RNILINVPFS YYAFSAVFFP FLTQRTKSKL VVARPSKVTE
401: TLLKYIPIEA IPVKYGGLKR DGEDAEFSGE HDAEIAEVVV KAGATEAIEI EAAEGDTTLT WDLTVLGWEV RYTEEFVPAD EGAYTIVVSK GRKVGAGEEA
501: VRNSFRAAEA GKVVITVENA TRGRKRVLFR HKAKSALAKK C

Best Arabidopsis Sequence Match ( AT1G30690.2 )
(BLAST)

001: MTAEVKVEEK QVESEVVIAP AVVPEETTVK AVVEETKVEE DESKPEGVEK SASFKEESDF FADLKESEKK ALSDLKSKLE EAIVDNTLLK TKKKESSPMK
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS

Arabidopsis Description

PATL4Patellin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q94C59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.