Factsheet for Bra023118.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02316	Canola	cytosol	87.78	100.0
Bra026229.1-P	Field mustard	cytosol	84.73	78.2
AT1G30690.2	Thale cress	cytosol	75.97	69.07
KRH11846	Soybean	cytosol	57.64	60.86
VIT_10s0003g05480.t01	Wine grape	cytosol	58.66	60.5
KRH36854	Soybean	cytosol	56.82	59.74
Solyc02g070210.2.1	Tomato	cytosol	52.75	54.99
PGSC0003DMT400054383	Potato	cytosol	51.73	54.04
GSMUA_Achr9P30580_001	Banana	cytosol	53.77	48.53
EER88801	Sorghum	cytosol	48.47	45.59
Bra000675.1-P	Field mustard	cytosol	28.72	45.48
Zm00001d046995_P001	Maize	plasma membrane	48.88	45.37
HORVU7Hr1G107070.1	Barley	cytosol	46.44	42.14
Bra036782.1-P	Field mustard	cytosol, plastid	35.03	41.75
TraesCS7A01G466800.1	Wheat	cytosol	46.03	40.72
TraesCS7B01G368100.1	Wheat	nucleus	46.64	40.46
TraesCS7D01G454600.1	Wheat	cytosol	46.64	40.03
Os06t0671800-01	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	28.92	39.12
Bra008013.1-P	Field mustard	nucleus	38.9	38.51
Bra003891.1-P	Field mustard	cytosol	38.29	37.3
Bra012843.1-P	Field mustard	cytosol	32.59	36.2
Bra016084.1-P	Field mustard	cytosol	33.6	29.57
Bra008012.1-P	Field mustard	cytosol	33.2	29.0
Bra003892.1-P	Field mustard	cytosol	29.53	27.78
Bra040854.1-P	Field mustard	cytosol	34.22	23.8

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlantsGene:Bra023118	EnsemblPlants:Bra023118.1	EnsemblPlants:Bra023118.1-P	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	InterPro:GOLD_dom	InterPro:IPR001251
InterPro:IPR009038	InterPro:IPR036865	UniProt:M4E2W7	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191
PFscan:PS50866	PANTHER:PTHR23324	PANTHER:PTHR23324:SF139	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI00025424E8	SEG:seg	:	:	:

Description

AT1G30690 (E=4e-156) | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein

Coordinates

chrA09:-:21584450..21586198

Molecular Weight (calculated)

55308.4 Da

IEP (calculated)

4.526

GRAVY (calculated)

-0.501

Length

491 amino acids

Sequence
(BLAST)

001: MTAEVKVEEK QVESAVVIAS VEEETTVKVV VEEEKETKVE EEEDESKPKG VEKISSFKEE SDFFSDLKES EKKALSDLKT KLEEAITENT LLKESPVKVE
101: KKKSEAIVTE EEAKAETSEP AVVAEDSPKE EAKTDANAET IEKESPEEEV KAETVDNDIE LWGVPLLPSK GAEGTDVILM KFLRARDFKV NEAFEMLKKT
201: LKWRKEHKID SILGEDFGED LASAAYMNGL DLESRPVCYN IYSVFGNEEL YQSRENLLRW RFQLMEKGIQ KLDLKPGGVT SLLQIHDLKN CPGLYKKELW
301: VAIKNAIVAL QDNYPELVFI NVPFLFYAGS TLLSPFLTQR TKSKFVVTRP ANVTETLLNY IPAEEIPVQY GGFKRYDDTE FSNEAVSEVV VKPGSSETIE
401: IPAAETEGTL VWDIAVLGWE VSYKEEFVPA NEGAYTIIVQ KGKKIGSNEG PLRNSFKNSE SGKIVLTVDN VSSKKKKRVL YRYRNKTESS C

Best Arabidopsis Sequence Match ( AT1G30690.2 )
(BLAST)

001: MTAEVKVEEK QVESEVVIAP AVVPEETTVK AVVEETKVEE DESKPEGVEK SASFKEESDF FADLKESEKK ALSDLKSKLE EAIVDNTLLK TKKKESSPMK
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS

Arabidopsis Description

PATL4Patellin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q94C59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.