Factsheet for Bra012843.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90637	Canola	cytosol	82.81	91.04
Bra036782.1-P	Field mustard	cytosol, plastid	80.32	86.17
AT3G51670.1	Thale cress	cytosol	79.41	85.82
Solyc09g015080.2.1	Tomato	cytosol, plastid	66.74	69.58
KRH76050	Soybean	cytosol	66.06	69.36
PGSC0003DMT400030364	Potato	plastid	66.52	69.01
KRH65546	Soybean	cytosol	65.61	68.88
Zm00001d052665_P001	Maize	cytosol	31.45	68.81
VIT_01s0137g00470.t01	Wine grape	cytosol	23.53	67.97
VIT_08s0058g00640.t01	Wine grape	cytosol, mitochondrion, nucleus	66.97	65.92
KRH00348	Soybean	cytosol	64.25	65.29
GSMUA_Achr2P18920_001	Banana	plastid	57.47	60.19
GSMUA_Achr5P07450_001	Banana	plastid	53.39	59.6
EES18028	Sorghum	plastid	57.92	59.4
TraesCS1D01G202700.1	Wheat	plastid	55.88	58.39
GSMUA_Achr3P09950_001	Banana	plastid	55.88	58.25
Os05t0345175-01	Rice	cytosol	10.41	58.23
GSMUA_Achr9P17890_001	Banana	cytosol	51.81	58.12
TraesCS1B01G213900.1	Wheat	plastid	55.43	57.92
TraesCS1A01G198900.1	Wheat	plastid	55.2	57.68
Zm00001d038005_P001	Maize	mitochondrion, plastid	55.66	57.48
Os05t0345100-00	Rice	plastid	37.78	53.53
Zm00001d010049_P001	Maize	plastid	57.47	50.6
Bra000675.1-P	Field mustard	cytosol	30.77	43.87
Bra008013.1-P	Field mustard	nucleus	39.82	35.48
Bra003891.1-P	Field mustard	cytosol	39.59	34.72
Bra023118.1-P	Field mustard	cytosol	36.2	32.59
Bra026229.1-P	Field mustard	cytosol	37.1	30.83
HORVU1Hr1G051510.3	Barley	plastid	31.9	30.13
Bra008012.1-P	Field mustard	cytosol	32.13	25.27
Bra003892.1-P	Field mustard	cytosol	29.64	25.1
Bra016084.1-P	Field mustard	cytosol	31.67	25.09
Bra040854.1-P	Field mustard	cytosol	32.35	20.25

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlantsGene:Bra012843	EnsemblPlants:Bra012843.1	EnsemblPlants:Bra012843.1-P	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:GOLD_dom	InterPro:GOLD_dom_sf	InterPro:IPR001251
InterPro:IPR009038	InterPro:IPR036865	UniProt:M4D8N3	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191
PFscan:PS50866	PANTHER:PTHR23324	PANTHER:PTHR23324:SF57	SMART:SM00516	SMART:SM01100	SUPFAM:SSF101576
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI00025406EA	SEG:seg	:	:

Description

AT3G51670 (E=5e-110) | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein

Coordinates

chrA03:+:21955917..21960518

Molecular Weight (calculated)

49758.2 Da

IEP (calculated)

6.348

GRAVY (calculated)

-0.480

Length

442 amino acids

Sequence
(BLAST)

001: MDSSLSPTPF DHQNTEPKKT FTTSLIPLRS NHFKEDTYFV SELKPSEAKS LHDLKHKLST SSLAASSSMW GVPLIGGDDR ADVILLKFLR ARDFKVGDSL
101: RMLEKCLEWR EEFKTEKLTE EDLGFKDLEG RVAYMRGYDK EGHPVCYNAY GVFKEREMYE RVFGDEEKIN KFLRWRVQVL ERGVKLLHFK PGGVNSIIQV
201: TDLKDMPKRE LRVASNLILS LFQDNYPEMV ATKEEERKKK TVGAEVVIGA EETVYWEAMV SATDGDEYAY VLPGAARELA TTIPFLTHRT KSKFVISKEG
301: NAAETLYKFI RPEDIPVQYG GLSRPTESQN GPPKPASEFS IKGGEKVNIQ IEGIEGGATI SWDIVVGGWD LEYTAEFVPN AEEGYAIVVE KPRRMKASDE
401: AVCNSFTTGE AGKLSISVDN SLSRKKKVAA YHYTVRKSTT AV

Best Arabidopsis Sequence Match ( AT3G51670.1 )
(BLAST)

001: MDASLSPFDH QKTQNTEPKK SFITSLITLR SNNIKEDTYF VSELKPTEQK SLQELKEKLS ASSSKASSMW GVSLLGGDDK ADVILLKFLR ARDFKVADSL
101: RMLEKCLEWR EEFKAEKLTE EDLGFKDLEG KVAYMRGYDK EGHPVCYNAY GVFKEKEMYE RVFGDEEKLN KFLRWRVQVL ERGVKMLHFK PGGVNSIIQV
201: TDLKDMPKRE LRVASNQILS LFQDNYPELV ATKIFINVPW YFSVIYSMFS PFLTQRTKSK FVMSKEGNAA ETLYKFIRPE DIPVQYGGLS RPTDSQNGPP
301: KPASEFSIKG GEKVNIQIEG IEGGATITWD IVVGGWDLEY SAEFVPNAEE SYAIVVEKPK KMKATDEAVC NSFTTVEAGK LILSVDNTLS RKKKVAAYRY
401: TVRKSTTTV

Arabidopsis Description

PATL6Patellin-6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.