Factsheet for Zm00001d010049_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18028	Sorghum	plastid	82.27	95.82
Zm00001d052665_P001	Maize	cytosol	36.85	91.58
Os05t0345175-01	Rice	cytosol	14.34	91.14
Zm00001d038005_P001	Maize	mitochondrion, plastid	77.29	90.65
TraesCS1D01G202700.1	Wheat	plastid	74.5	88.42
TraesCS1B01G213900.1	Wheat	plastid	74.5	88.42
TraesCS1A01G198900.1	Wheat	plastid	74.5	88.42
Os05t0345100-00	Rice	plastid	50.8	81.73
GSMUA_Achr5P07450_001	Banana	plastid	59.36	75.25
GSMUA_Achr9P17890_001	Banana	cytosol	57.57	73.35
GSMUA_Achr2P18920_001	Banana	plastid	61.35	72.99
GSMUA_Achr3P09950_001	Banana	plastid	59.36	70.28
CDX78026	Canola	cytosol, plastid	54.18	66.02
Bra036782.1-P	Field mustard	cytosol, plastid	54.18	66.02
Solyc09g015080.2.1	Tomato	cytosol, plastid	55.58	65.8
PGSC0003DMT400030364	Potato	plastid	55.78	65.73
CDX73705	Canola	cytosol, plastid	53.78	65.53
KRH00348	Soybean	cytosol	56.57	65.29
KRH65546	Soybean	cytosol	54.58	65.08
CDY13832	Canola	cytosol, plastid	35.86	64.98
CDX73635	Canola	cytosol, plastid	35.86	64.98
CDX78958	Canola	cytosol, plastid	35.86	64.98
CDY29572	Canola	cytosol, plastid	35.86	64.98
KRH76050	Soybean	cytosol	54.18	64.61
AT3G51670.1	Thale cress	cytosol	52.19	64.06
VIT_01s0137g00470.t01	Wine grape	cytosol	19.12	62.75
VIT_08s0058g00640.t01	Wine grape	cytosol, mitochondrion, nucleus	55.98	62.58
CDX90637	Canola	cytosol	48.21	60.2
Bra012843.1-P	Field mustard	cytosol	50.6	57.47
Zm00001d041705_P001	Maize	cytosol, mitochondrion	9.56	44.86
Zm00001d005304_P001	Maize	mitochondrion	23.31	43.01
Zm00001d005249_P001	Maize	mitochondrion	23.71	42.96
Zm00001d043169_P001	Maize	cytosol	17.53	41.71
CDY29036	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	48.21	40.6
HORVU1Hr1G051510.3	Barley	plastid	35.06	37.61
Zm00001d046995_P001	Maize	plasma membrane	35.66	33.84
Zm00001d042664_P001	Maize	plasma membrane	37.45	32.92
Zm00001d012254_P003	Maize	mitochondrion	36.06	32.55
Zm00001d038262_P001	Maize	plasma membrane	37.65	30.48
Zm00001d010205_P002	Maize	cytosol	29.48	27.46

Protein Annotations

EntrezGene:100281982	Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A1D6FNX2	ProteinID:AQK93336.1	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650
PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF57	SMART:SM00516	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI0008425626	EnsemblPlantsGene:Zm00001d010049	EnsemblPlants:Zm00001d010049_P001	EnsemblPlants:Zm00001d010049_T001	SEG:seg

Description

Patellin-5%3B Putative patellin family protein isoform 1%3B Putative patellin family protein isoform 2

Coordinates

chr8:-:96929763..96933742

Molecular Weight (calculated)

55611.7 Da

IEP (calculated)

8.996

GRAVY (calculated)

-0.210

Length

502 amino acids

Sequence
(BLAST)

001: MSPTTTPPPA PVAAPTSKGA KRSLMSSLMD ATALLRSSSF KEDSYVAAAL PASELRALAD LKALLATHPD PISIWGVPLN PRSPPAAADD AAPVDERADV
101: VLLKFLRARD FRVRDAHAMV LRCAAWRAEF GADAVLDEEL GFKDLEGIVA YMHGWDRDGH PVCYNAYGVF KDRDMYERVF GDGDRLARFL RWRVQVMERG
201: VRALTLRPGG VNAIIQVTDL KDMPKRELRA ASNQILSLFQ DNYPEMVARK VFINVPWYFS VLFSMISPFL TERTKSKFVI AREGNVAETL YKFIRPELVP
301: VQYGGLSRTG DLENGPPKPA SEFTIKGGEK VFLEIDGIEG LKFRNAPAHC TVQLCTPSLS TVVTSYAMRE FREDTKGNVH VSLAHGSVRV SKKLVWLSRH
401: ASQDQLKLSD VQKQSNAGAT ITWDLVVGGW DLEYGAEYVP AAEDSYTLCV EKTRMVSATA EEPVHNAFTA REAGKMVLSI DNSGSRKRKV AAYRYFVRKS
501: SA

Best Arabidopsis Sequence Match ( AT3G51670.1 )
(BLAST)

001: MDASLSPFDH QKTQNTEPKK SFITSLITLR SNNIKEDTYF VSELKPTEQK SLQELKEKLS ASSSKASSMW GVSLLGGDDK ADVILLKFLR ARDFKVADSL
101: RMLEKCLEWR EEFKAEKLTE EDLGFKDLEG KVAYMRGYDK EGHPVCYNAY GVFKEKEMYE RVFGDEEKLN KFLRWRVQVL ERGVKMLHFK PGGVNSIIQV
201: TDLKDMPKRE LRVASNQILS LFQDNYPELV ATKIFINVPW YFSVIYSMFS PFLTQRTKSK FVMSKEGNAA ETLYKFIRPE DIPVQYGGLS RPTDSQNGPP
301: KPASEFSIKG GEKVNIQIEG IEGGATITWD IVVGGWDLEY SAEFVPNAEE SYAIVVEKPK KMKATDEAVC NSFTTVEAGK LILSVDNTLS RKKKVAAYRY
401: TVRKSTTTV

Arabidopsis Description

PATL6Patellin-6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.