Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29572 | Canola | cytosol, plastid | 100.0 | 100.0 |
| CDX78958 | Canola | cytosol, plastid | 100.0 | 100.0 |
| CDY13832 | Canola | cytosol, plastid | 100.0 | 100.0 |
| VIT_01s0137g00470.t01 | Wine grape | cytosol | 37.55 | 67.97 |
| Bra036782.1-P | Field mustard | cytosol, plastid | 100.0 | 67.23 |
| CDX78026 | Canola | cytosol, plastid | 100.0 | 67.23 |
| CDX73705 | Canola | cytosol, plastid | 99.28 | 66.75 |
| AT3G51670.1 | Thale cress | cytosol | 89.89 | 60.88 |
| Zm00001d052665_P001 | Maize | cytosol | 41.16 | 56.44 |
| CDX90637 | Canola | cytosol | 81.59 | 56.22 |
| KRH76050 | Soybean | cytosol | 74.73 | 49.17 |
| Solyc09g015080.2.1 | Tomato | cytosol, plastid | 75.09 | 49.06 |
| KRH65546 | Soybean | cytosol | 74.01 | 48.69 |
| PGSC0003DMT400030364 | Potato | plastid | 74.37 | 48.36 |
| KRH00348 | Soybean | cytosol | 73.65 | 46.9 |
| VIT_08s0058g00640.t01 | Wine grape | cytosol, mitochondrion, nucleus | 74.73 | 46.1 |
| Os05t0345100-00 | Rice | plastid | 51.62 | 45.83 |
| EES18028 | Sorghum | plastid | 65.7 | 42.23 |
| GSMUA_Achr2P18920_001 | Banana | plastid | 64.26 | 42.18 |
| Zm00001d038005_P001 | Maize | mitochondrion, plastid | 63.54 | 41.12 |
| GSMUA_Achr3P09950_001 | Banana | plastid | 62.82 | 41.04 |
| GSMUA_Achr5P07450_001 | Banana | plastid | 58.48 | 40.91 |
| TraesCS1D01G202700.1 | Wheat | plastid | 62.09 | 40.66 |
| TraesCS1A01G198900.1 | Wheat | plastid | 61.73 | 40.43 |
| TraesCS1B01G213900.1 | Wheat | plastid | 61.73 | 40.43 |
| GSMUA_Achr9P17890_001 | Banana | cytosol | 57.04 | 40.1 |
| CDY29036 | Canola | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 79.78 | 37.08 |
| Zm00001d010049_P001 | Maize | plastid | 64.98 | 35.86 |
| CDY71835 | Canola | cytosol | 31.77 | 30.77 |
| CDX90715 | Canola | cytosol | 33.21 | 29.68 |
| CDY50441 | Canola | plasma membrane | 45.49 | 25.98 |
| CDX82180 | Canola | nucleus | 45.85 | 25.97 |
| CDY03654 | Canola | nucleus | 45.85 | 25.97 |
| CDY02316 | Canola | cytosol | 36.46 | 23.43 |
| CDY50723 | Canola | nucleus | 44.04 | 23.02 |
| CDX68278 | Canola | cytosol | 36.46 | 23.01 |
| CDX77578 | Canola | cytosol | 44.04 | 22.93 |
| CDY09549 | Canola | nucleus | 44.04 | 22.8 |
| CDY71842 | Canola | cytosol | 38.27 | 22.04 |
| CDX68279 | Canola | cytosol | 36.82 | 19.21 |
| CDY03655 | Canola | cytosol | 38.63 | 18.94 |
| CDY05051 | Canola | nucleus | 47.29 | 18.88 |
| CDX96377 | Canola | cytosol | 37.55 | 18.7 |
| CDX82182 | Canola | cytosol | 38.63 | 18.61 |
| CDY66581 | Canola | cytosol | 38.99 | 17.25 |
| CDY21368 | Canola | cytosol | 38.99 | 16.56 |
| HORVU1Hr1G051510.3 | Barley | plastid | 18.05 | 10.68 |
| CDY58916 | Canola | cytosol | 1.08 | 2.17 |
| Os05t0345175-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.1 | GO:A0A078FLG0 | UniProt:A0A078FLG0 | EnsemblPlants:CDX73635 | ProteinID:CDX73635 |
| ProteinID:CDX73635.1 | ProteinID:CDY13832.1 | ProteinID:CDY29572.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | EnsemblPlantsGene:GSBRNA2T00109205001 | InterPro:IPR001251 | InterPro:IPR036865 | PFAM:PF00650 | PFAM:PF03765 |
| PRINTS:PR00180 | PFscan:PS50191 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF57 | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0004EE5B85 | SEG:seg | : | : |
Description
BnaC08g23680DBnaA03g54170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLG0]
Coordinates
chrLK031799:+:1784608..1786081
Molecular Weight (calculated)
32020.6 Da
IEP (calculated)
8.893
GRAVY (calculated)
-0.464
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSALSPSPF DPTKTPNAEP KKSFMSSLIT LRSNHFKEDT YFVSELKPAE QKALQDLKEK LSSSSFGASS MWGVPLLGGD DRADVILLKF LRARDFKVGD
101: SLRMLEKCLE WREEFKAEKL TEEDLGFKDL EGKVAYMRGY DKEGHPVCYN AYGVFKEREM YERVFGDDEK LKSFLRWRVQ VLERGVKMLH FKPGGVNSMI
201: QVTDLKDMPK RELRVASNQI LSLFQDNYPE MVATKIFINV PWYFSVIYSM FSPFLTHRTK SKFVMSKEGN AAETLYK
101: SLRMLEKCLE WREEFKAEKL TEEDLGFKDL EGKVAYMRGY DKEGHPVCYN AYGVFKEREM YERVFGDDEK LKSFLRWRVQ VLERGVKMLH FKPGGVNSMI
201: QVTDLKDMPK RELRVASNQI LSLFQDNYPE MVATKIFINV PWYFSVIYSM FSPFLTHRTK SKFVMSKEGN AAETLYK
001: MDASLSPFDH QKTQNTEPKK SFITSLITLR SNNIKEDTYF VSELKPTEQK SLQELKEKLS ASSSKASSMW GVSLLGGDDK ADVILLKFLR ARDFKVADSL
101: RMLEKCLEWR EEFKAEKLTE EDLGFKDLEG KVAYMRGYDK EGHPVCYNAY GVFKEKEMYE RVFGDEEKLN KFLRWRVQVL ERGVKMLHFK PGGVNSIIQV
201: TDLKDMPKRE LRVASNQILS LFQDNYPELV ATKIFINVPW YFSVIYSMFS PFLTQRTKSK FVMSKEGNAA ETLYKFIRPE DIPVQYGGLS RPTDSQNGPP
301: KPASEFSIKG GEKVNIQIEG IEGGATITWD IVVGGWDLEY SAEFVPNAEE SYAIVVEKPK KMKATDEAVC NSFTTVEAGK LILSVDNTLS RKKKVAAYRY
401: TVRKSTTTV
101: RMLEKCLEWR EEFKAEKLTE EDLGFKDLEG KVAYMRGYDK EGHPVCYNAY GVFKEKEMYE RVFGDEEKLN KFLRWRVQVL ERGVKMLHFK PGGVNSIIQV
201: TDLKDMPKRE LRVASNQILS LFQDNYPELV ATKIFINVPW YFSVIYSMFS PFLTQRTKSK FVMSKEGNAA ETLYKFIRPE DIPVQYGGLS RPTDSQNGPP
301: KPASEFSIKG GEKVNIQIEG IEGGATITWD IVVGGWDLEY SAEFVPNAEE SYAIVVEKPK KMKATDEAVC NSFTTVEAGK LILSVDNTLS RKKKVAAYRY
401: TVRKSTTTV
Arabidopsis Description
PATL6Patellin-6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.