Factsheet for Bra036782.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29572	Canola	cytosol, plastid	67.23	100.0
CDY13832	Canola	cytosol, plastid	67.23	100.0
CDX78958	Canola	cytosol, plastid	67.23	100.0
CDX78026	Canola	cytosol, plastid	100.0	100.0
CDX73635	Canola	cytosol, plastid	67.23	100.0
CDX73705	Canola	cytosol, plastid	99.27	99.27
AT3G51670.1	Thale cress	cytosol	91.26	91.93
Bra012843.1-P	Field mustard	cytosol	86.17	80.32
Solyc09g015080.2.1	Tomato	cytosol, plastid	77.43	75.24
KRH76050	Soybean	cytosol	76.7	75.06
KRH65546	Soybean	cytosol	76.21	74.58
PGSC0003DMT400030364	Potato	plastid	76.94	74.41
Zm00001d052665_P001	Maize	cytosol	36.41	74.26
VIT_08s0058g00640.t01	Wine grape	cytosol, mitochondrion, nucleus	76.94	70.6
KRH00348	Soybean	cytosol	74.03	70.11
VIT_01s0137g00470.t01	Wine grape	cytosol	25.49	68.63
GSMUA_Achr2P18920_001	Banana	plastid	65.29	63.74
EES18028	Sorghum	plastid	66.5	63.57
GSMUA_Achr5P07450_001	Banana	plastid	60.92	63.38
GSMUA_Achr9P17890_001	Banana	cytosol	59.95	62.69
Os05t0345175-01	Rice	cytosol	11.89	62.03
TraesCS1D01G202700.1	Wheat	plastid	63.35	61.7
GSMUA_Achr3P09950_001	Banana	plastid	63.35	61.56
Zm00001d038005_P001	Maize	mitochondrion, plastid	63.84	61.45
TraesCS1B01G213900.1	Wheat	plastid	62.86	61.23
TraesCS1A01G198900.1	Wheat	plastid	62.62	60.99
Os05t0345100-00	Rice	plastid	44.17	58.33
Zm00001d010049_P001	Maize	plastid	66.02	54.18
Bra000675.1-P	Field mustard	cytosol	35.44	47.1
Bra008013.1-P	Field mustard	nucleus	44.9	37.3
Bra003891.1-P	Field mustard	cytosol	44.42	36.31
Bra023118.1-P	Field mustard	cytosol	41.75	35.03
Bra026229.1-P	Field mustard	cytosol	42.72	33.08
HORVU1Hr1G051510.3	Barley	plastid	33.74	29.7
Bra008012.1-P	Field mustard	cytosol	37.62	27.58
Bra016084.1-P	Field mustard	cytosol	36.89	27.24
Bra003892.1-P	Field mustard	cytosol	34.22	27.01
Bra040854.1-P	Field mustard	cytosol	37.86	22.1

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlantsGene:Bra036782	EnsemblPlants:Bra036782.1	EnsemblPlants:Bra036782.1-P	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:GOLD_dom	InterPro:GOLD_dom_sf	InterPro:IPR001251
InterPro:IPR009038	InterPro:IPR036865	UniProt:M4F6S2	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191
PFscan:PS50866	PANTHER:PTHR23324	PANTHER:PTHR23324:SF57	SMART:SM00516	SMART:SM01100	SUPFAM:SSF101576
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0002542D3B	SEG:seg	:	:

Description

AT3G51670 (E=3e-215) | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein

Coordinates

chrA09:+:25853689..25855713

Molecular Weight (calculated)

46585.8 Da

IEP (calculated)

8.639

GRAVY (calculated)

-0.426

Length

412 amino acids

Sequence
(BLAST)

001: MDSALSPSPF DPTKTPNAEP KKSFMSSLIT LRSNHFKEDT YFVSELKPAE QKALQDLKEK LSSSSFGASS MWGVPLLGGD DRADVILLKF LRARDFKVGD
101: SLRMLEKCLE WREEFKAEKL TEEDLGFKDL EGKVAYMRGY DKEGHPVCYN AYGVFKEREM YERVFGDDEK LKSFLRWRVQ VLERGVKMLH FKPGGVNSMI
201: QVTDLKDMPK RELRVASNQI LSLFQDNYPE MVATKIFINV PWYFSVIYSM FSPFLTHRTK SKFVMSKEGN AAETLYKFIR PEDIPVQYGG LSRPTDSQNG
301: PPKPASEFSI KGGEKVNIQI EGIEGGATIT WDIVVGGWDL EYTAEFVPNA EGSYAIVVEK PRKMKASDEA VCNSFTTGEA GKLILSVDNT LSRKKKVAAY
401: RYTVRKSTTA AV

Best Arabidopsis Sequence Match ( AT3G51670.1 )
(BLAST)

001: MDASLSPFDH QKTQNTEPKK SFITSLITLR SNNIKEDTYF VSELKPTEQK SLQELKEKLS ASSSKASSMW GVSLLGGDDK ADVILLKFLR ARDFKVADSL
101: RMLEKCLEWR EEFKAEKLTE EDLGFKDLEG KVAYMRGYDK EGHPVCYNAY GVFKEKEMYE RVFGDEEKLN KFLRWRVQVL ERGVKMLHFK PGGVNSIIQV
201: TDLKDMPKRE LRVASNQILS LFQDNYPELV ATKIFINVPW YFSVIYSMFS PFLTQRTKSK FVMSKEGNAA ETLYKFIRPE DIPVQYGGLS RPTDSQNGPP
301: KPASEFSIKG GEKVNIQIEG IEGGATITWD IVVGGWDLEY SAEFVPNAEE SYAIVVEKPK KMKATDEAVC NSFTTVEAGK LILSVDNTLS RKKKVAAYRY
401: TVRKSTTTV

Arabidopsis Description

PATL6Patellin-6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.