Factsheet for Bra000675.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90715	Canola	cytosol	98.39	98.39
VIT_09s0002g09040.t01	Wine grape	cytosol	30.0	81.58
Zm00001d041705_P001	Maize	cytosol, mitochondrion	19.03	55.14
Zm00001d005249_P001	Maize	mitochondrion	48.39	54.15
Zm00001d043169_P001	Maize	cytosol	35.48	52.13
KRH23753	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	70.32	51.42
Zm00001d005304_P001	Maize	mitochondrion	44.84	51.1
HORVU3Hr1G082150.1	Barley	cytosol	56.13	50.58
GSMUA_Achr2P08100_001	Banana	cytosol	63.87	49.87
Bra008013.1-P	Field mustard	nucleus	74.84	46.77
Solyc11g027880.1.1	Tomato	cytosol, endoplasmic reticulum, plastid	73.55	46.53
PGSC0003DMT400065886	Potato	cytosol	73.55	46.44
Bra003891.1-P	Field mustard	cytosol	74.52	45.83
CDY05051	Canola	nucleus	98.06	43.8
GSMUA_Achr9P08580_001	Banana	cytosol, plasma membrane	62.9	42.76
AT4G09160.1	Thale cress	cytosol	90.32	41.92
VIT_05s0029g01570.t01	Wine grape	cytosol	52.9	40.8
GSMUA_Achr7P23220_001	Banana	cytosol	60.97	37.8
VIT_18s0041g00420.t01	Wine grape	cytosol	70.65	37.63
GSMUA_Achr6P07270_001	Banana	cytosol, nucleus, plastid	60.0	35.77
Bra036782.1-P	Field mustard	cytosol, plastid	47.1	35.44
GSMUA_Achr3P22170_001	Banana	cytosol	58.71	34.6
GSMUA_Achr5P25970_001	Banana	cytosol	60.65	33.87
GSMUA_Achr6P18780_001	Banana	cytosol	62.26	33.28
Zm00001d012254_P003	Maize	mitochondrion	59.68	33.27
OQU78068	Sorghum	cytosol	55.16	32.51
Zm00001d042664_P001	Maize	plasma membrane	59.03	32.05
KXG33790	Sorghum	cytosol	59.68	31.36
Os05t0429400-01	Rice	plasma membrane	58.71	31.11
EES10230	Sorghum	cytosol	50.97	30.86
TraesCS3A01G385300.1	Wheat	cytosol	57.42	30.8
TraesCS3B01G417500.1	Wheat	golgi	57.42	30.8
Bra012843.1-P	Field mustard	cytosol	43.87	30.77
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	61.94	30.72
TraesCS3D01G378300.1	Wheat	cytosol	57.74	30.49
Os01t0874700-01	Rice	plasma membrane	60.0	30.34
TraesCS1B01G279200.1	Wheat	cytosol	58.06	29.51
TraesCS1D01G268600.1	Wheat	golgi	58.06	29.51
TraesCS1A01G268500.1	Wheat	cytosol	58.06	29.51
Zm00001d038262_P001	Maize	plasma membrane	58.39	29.19
Bra023118.1-P	Field mustard	cytosol	45.48	28.72
Bra026229.1-P	Field mustard	cytosol	47.74	27.82
HORVU3Hr1G082110.2	Barley	plastid	57.1	27.44
HORVU1Hr1G075150.4	Barley	plasma membrane	58.71	27.41
Bra016084.1-P	Field mustard	cytosol	48.39	26.88
Bra008012.1-P	Field mustard	cytosol	47.1	25.98
Bra003892.1-P	Field mustard	cytosol	43.55	25.86
Zm00001d010205_P002	Maize	cytosol	42.26	24.3
Bra040854.1-P	Field mustard	cytosol	48.06	21.1

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlantsGene:Bra000675	EnsemblPlants:Bra000675.1	EnsemblPlants:Bra000675.1-P	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507
GO:GO:0009536	InterPro:GOLD_dom	InterPro:IPR001251	InterPro:IPR009038	InterPro:IPR036865	UniProt:M4C8Z7
PFAM:PF00650	PFscan:PS50191	PFscan:PS50866	PANTHER:PTHR23324	PANTHER:PTHR23324:SF48	SMART:SM00516
SUPFAM:SSF52087	UniParc:UPI00025402EB	:	:	:	:

Description

AT4G09160 (E=3e-167) | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein

Coordinates

chrA03:+:12401180..12402364

Molecular Weight (calculated)

35936.1 Da

IEP (calculated)

6.526

GRAVY (calculated)

-0.391

Length

310 amino acids

Sequence
(BLAST)

001: MLTKTLQWRM EFNIEELLDE NLGDHLDKVV FMQGQDRENH PVCYNVYGEF QDKDLYQKTF SDEEKRDRFL RWRIQFLEKS IRKLDFVAGG VSTICQVNDL
101: KNSPGPGKTE LRVATKQALN LLQDNYPEFI SKQIFINVPW WYLAFYRIIS PFMTQRSKSK LVFSGPSRSA ETLFKYISPE HVPVQYGGLS VDNCDCNSDF
201: THEDTATEIT VKPTTKQTVE IIVYERCTIV WEIRVVGWEV MYGAEFVPEN KEGYTVIIQK PRKVASGDEP VVSQSFKVGE VGKILLTVDN PTSNKKILIY
301: RFKVKPLPCE

Best Arabidopsis Sequence Match ( AT4G09160.1 )
(BLAST)

001: MSQDSATTTP PPPLTSDVSM PSGEEDEPKH VTSEEEAPVT SETNLKLPLM PELEESNHTA EVVSEKVTPE TMTLESEGLN HAAEDSEQTH EVTPETETAK
101: LEVLNHTAED SEQTHEVTPE KETVKSEFLN HVAEDSEQTH EVTPETETVK SEVLNHAAED SEQPRGVTPT PETETSEADT SLLVTSETEE PNHAAEDYSE
201: TEPSQKLMLE QRRKYMEVED WTEPELPDEA VLEAAASVPE PKQPEPQTPP PPPSTTTSTV ASRSLAEMMN REEAEVEEKQ KIQIPRSLGS FKEETNKISD
301: LSETELNALQ ELRHLLQVSQ DSSKTSIWGV PLLKDDRTDV VLLKFLRARD FKPQEAYSML NKTLQWRIDF NIEELLDENL GDDLDKVVFM QGQDKENHPV
401: CYNVYGEFQN KDLYQKTFSD EEKRERFLRW RIQFLEKSIR NLDFVAGGVS TICQVNDLKN SPGPGKTELR LATKQALHLL QDNYPEFVSK QIFINVPWWY
501: LAFYRIISPF MSQRSKSKLV FAGPSRSAET LLKYISPEHV PVQYGGLSVD NCECNSDFTH DDIATEITVK PTTKQTVEII VYEKCTIVWE IRVVGWEVSY
601: GAEFVPENKE GYTVIIQKPR KMTAKNELVV SHSFKVGEVG RILLTVDNPT STKKMLIYRF KVKPLACE

Arabidopsis Description

PATL5Patellin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.