Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000675.1-P | Field mustard | cytosol | 41.92 | 90.32 |
| CDX90715 | Canola | cytosol | 41.77 | 90.0 |
| VIT_09s0002g09040.t01 | Wine grape | cytosol | 14.22 | 83.33 |
| CDY05051 | Canola | nucleus | 75.45 | 72.62 |
| KRH23753 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 39.82 | 62.74 |
| PGSC0003DMT400065886 | Potato | cytosol | 45.06 | 61.3 |
| Solyc11g027880.1.1 | Tomato | cytosol, endoplasmic reticulum, plastid | 44.46 | 60.61 |
| AT1G72160.1 | Thale cress | nucleus | 44.31 | 60.41 |
| GSMUA_Achr2P08100_001 | Banana | cytosol | 33.68 | 56.68 |
| HORVU3Hr1G082150.1 | Barley | cytosol | 28.89 | 56.1 |
| Zm00001d041705_P001 | Maize | cytosol, mitochondrion | 8.68 | 54.21 |
| GSMUA_Achr9P08580_001 | Banana | cytosol, plasma membrane | 36.53 | 53.51 |
| Zm00001d005249_P001 | Maize | mitochondrion | 22.16 | 53.43 |
| Zm00001d043169_P001 | Maize | cytosol | 16.17 | 51.18 |
| Zm00001d005304_P001 | Maize | mitochondrion | 20.51 | 50.37 |
| GSMUA_Achr7P23220_001 | Banana | cytosol | 35.93 | 48.0 |
| VIT_05s0029g01570.t01 | Wine grape | cytosol | 27.99 | 46.52 |
| AT3G51670.1 | Thale cress | cytosol | 28.14 | 45.97 |
| VIT_18s0041g00420.t01 | Wine grape | cytosol | 39.37 | 45.19 |
| GSMUA_Achr3P22170_001 | Banana | cytosol | 35.03 | 44.49 |
| GSMUA_Achr6P07270_001 | Banana | cytosol, nucleus, plastid | 34.43 | 44.23 |
| GSMUA_Achr6P18780_001 | Banana | cytosol | 35.48 | 40.86 |
| Zm00001d012254_P003 | Maize | mitochondrion | 33.53 | 40.29 |
| GSMUA_Achr5P25970_001 | Banana | cytosol | 33.08 | 39.82 |
| EES10230 | Sorghum | cytosol | 30.09 | 39.26 |
| Zm00001d042664_P001 | Maize | plasma membrane | 33.38 | 39.05 |
| Os05t0429400-01 | Rice | plasma membrane | 33.68 | 38.46 |
| KXG33790 | Sorghum | cytosol | 33.68 | 38.14 |
| TraesCS3A01G385300.1 | Wheat | cytosol | 32.93 | 38.06 |
| TraesCS3B01G417500.1 | Wheat | golgi | 32.93 | 38.06 |
| Os01t0874700-01 | Rice | plasma membrane | 34.73 | 37.85 |
| TraesCS3D01G378300.1 | Wheat | cytosol | 33.08 | 37.65 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, plastid | 34.43 | 36.8 |
| Zm00001d038262_P001 | Maize | plasma membrane | 33.98 | 36.61 |
| OQU78068 | Sorghum | cytosol | 28.74 | 36.5 |
| TraesCS1A01G268500.1 | Wheat | cytosol | 32.93 | 36.07 |
| TraesCS1D01G268600.1 | Wheat | golgi | 32.78 | 35.9 |
| TraesCS1B01G279200.1 | Wheat | cytosol | 32.63 | 35.74 |
| AT1G30690.2 | Thale cress | cytosol | 27.84 | 34.44 |
| HORVU3Hr1G082110.2 | Barley | plastid | 32.93 | 34.11 |
| HORVU1Hr1G075150.4 | Barley | plasma membrane | 33.38 | 33.58 |
| AT1G72150.1 | Thale cress | cytosol | 28.74 | 33.51 |
| Zm00001d010205_P002 | Maize | cytosol | 26.65 | 33.02 |
| AT1G22530.1 | Thale cress | cytosol | 29.19 | 28.55 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.1 | EntrezGene:826497 | ProteinID:AEE82730.1 | EMBL:AK229180 | ArrayExpress:AT4G09160 |
| EnsemblPlantsGene:AT4G09160 | RefSeq:AT4G09160 | TAIR:AT4G09160 | RefSeq:AT4G09160-TAIR-G | EnsemblPlants:AT4G09160.1 | TAIR:AT4G09160.1 |
| Unigene:At.4208 | ProteinID:CAB78040.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0051301 | InterPro:GOLD_dom | InterPro:GOLD_dom_sf | InterPro:IPR001251 | InterPro:IPR009038 |
| InterPro:IPR036865 | RefSeq:NP_192655.2 | PFAM:PF00650 | PFAM:PF03765 | PO:PO:0000293 | PFscan:PS50191 |
| PFscan:PS50866 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF48 | UniProt:Q9M0R2 | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF101576 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0000196BCC | SEG:seg | : |
Description
PATL5Patellin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R2]
Coordinates
chr4:+:5839599..5842456
Molecular Weight (calculated)
75751.5 Da
IEP (calculated)
4.383
GRAVY (calculated)
-0.670
Length
668 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQDSATTTP PPPLTSDVSM PSGEEDEPKH VTSEEEAPVT SETNLKLPLM PELEESNHTA EVVSEKVTPE TMTLESEGLN HAAEDSEQTH EVTPETETAK
101: LEVLNHTAED SEQTHEVTPE KETVKSEFLN HVAEDSEQTH EVTPETETVK SEVLNHAAED SEQPRGVTPT PETETSEADT SLLVTSETEE PNHAAEDYSE
201: TEPSQKLMLE QRRKYMEVED WTEPELPDEA VLEAAASVPE PKQPEPQTPP PPPSTTTSTV ASRSLAEMMN REEAEVEEKQ KIQIPRSLGS FKEETNKISD
301: LSETELNALQ ELRHLLQVSQ DSSKTSIWGV PLLKDDRTDV VLLKFLRARD FKPQEAYSML NKTLQWRIDF NIEELLDENL GDDLDKVVFM QGQDKENHPV
401: CYNVYGEFQN KDLYQKTFSD EEKRERFLRW RIQFLEKSIR NLDFVAGGVS TICQVNDLKN SPGPGKTELR LATKQALHLL QDNYPEFVSK QIFINVPWWY
501: LAFYRIISPF MSQRSKSKLV FAGPSRSAET LLKYISPEHV PVQYGGLSVD NCECNSDFTH DDIATEITVK PTTKQTVEII VYEKCTIVWE IRVVGWEVSY
601: GAEFVPENKE GYTVIIQKPR KMTAKNELVV SHSFKVGEVG RILLTVDNPT STKKMLIYRF KVKPLACE
101: LEVLNHTAED SEQTHEVTPE KETVKSEFLN HVAEDSEQTH EVTPETETVK SEVLNHAAED SEQPRGVTPT PETETSEADT SLLVTSETEE PNHAAEDYSE
201: TEPSQKLMLE QRRKYMEVED WTEPELPDEA VLEAAASVPE PKQPEPQTPP PPPSTTTSTV ASRSLAEMMN REEAEVEEKQ KIQIPRSLGS FKEETNKISD
301: LSETELNALQ ELRHLLQVSQ DSSKTSIWGV PLLKDDRTDV VLLKFLRARD FKPQEAYSML NKTLQWRIDF NIEELLDENL GDDLDKVVFM QGQDKENHPV
401: CYNVYGEFQN KDLYQKTFSD EEKRERFLRW RIQFLEKSIR NLDFVAGGVS TICQVNDLKN SPGPGKTELR LATKQALHLL QDNYPEFVSK QIFINVPWWY
501: LAFYRIISPF MSQRSKSKLV FAGPSRSAET LLKYISPEHV PVQYGGLSVD NCECNSDFTH DDIATEITVK PTTKQTVEII VYEKCTIVWE IRVVGWEVSY
601: GAEFVPENKE GYTVIIQKPR KMTAKNELVV SHSFKVGEVG RILLTVDNPT STKKMLIYRF KVKPLACE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.