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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY66581 Canola cytosol 70.42 76.84
CDY21368 Canola cytosol 73.21 76.69
Bra040854.1-P Field mustard cytosol 78.62 76.06
AT1G72150.1 Thale cress cytosol 59.0 70.33
Zm00001d041705_P001 Maize cytosol, mitochondrion 8.78 56.07
GSMUA_Achr2P08100_001 Banana cytosol 31.77 54.66
KRG99105 Soybean cytosol 11.57 53.38
HORVU3Hr1G082150.1 Barley cytosol 26.21 52.03
GSMUA_Achr7P23220_001 Banana cytosol 35.72 48.8
Zm00001d005304_P001 Maize mitochondrion 19.03 47.79
Zm00001d005249_P001 Maize mitochondrion 19.33 47.65
GSMUA_Achr9P08580_001 Banana cytosol, plasma membrane 31.77 47.59
Solyc06g064940.2.1 Tomato nucleus 40.12 47.24
Solyc11g051160.1.1 Tomato extracellular, plastid 40.56 47.03
PGSC0003DMT400013297 Potato cytosol 39.39 46.62
Zm00001d043169_P001 Maize cytosol 14.2 45.97
AT1G72160.1 Thale cress nucleus 31.92 44.49
VIT_18s0041g00430.t01 Wine grape cytosol 39.09 44.06
KRH23751 Soybean endoplasmic reticulum 39.09 44.06
GSMUA_Achr6P18780_001 Banana cytosol 37.34 43.97
GSMUA_Achr3P22170_001 Banana cytosol 33.53 43.54
Zm00001d012254_P003 Maize mitochondrion 35.43 43.53
GSMUA_Achr5P25970_001 Banana cytosol 35.29 43.42
TraesCS3B01G417500.1 Wheat golgi 36.6 43.25
TraesCS3A01G385300.1 Wheat cytosol 36.6 43.25
KRH44929 Soybean endoplasmic reticulum 36.46 43.23
GSMUA_Achr6P07270_001 Banana cytosol, nucleus, plastid 32.8 43.08
TraesCS3D01G378300.1 Wheat cytosol 36.02 41.91
KXG33790 Sorghum cytosol 36.16 41.86
Os05t0429400-01 Rice plasma membrane 35.72 41.71
Zm00001d042664_P001 Maize plasma membrane 34.7 41.51
Os01t0874700-01 Rice plasma membrane 37.04 41.27
TraesCS1B01G279200.1 Wheat cytosol 36.46 40.82
Zm00001d038262_P001 Maize plasma membrane 36.75 40.48
EES10230 Sorghum cytosol 30.31 40.43
TraesCS1A01G268500.1 Wheat cytosol 36.02 40.33
TraesCS1D01G268600.1 Wheat golgi 35.87 40.16
Zm00001d010205_P002 Maize cytosol 31.19 39.52
OQU78068 Sorghum cytosol 30.16 39.16
HORVU3Hr1G082110.2 Barley plastid 36.6 38.76
AT3G51670.1 Thale cress cytosol 23.13 38.63
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, plastid 34.7 37.92
HORVU1Hr1G075150.4 Barley plasma membrane 36.16 37.2
AT1G30690.2 Thale cress cytosol 27.96 35.37
AT4G09160.1 Thale cress cytosol 28.55 29.19
Protein Annotations
Gene3D:3.40.525.10MapMan:35.1EntrezGene:838859ProteinID:AAF18525.1ProteinID:AEE30253.1EMBL:AK220983
ArrayExpress:AT1G22530EnsemblPlantsGene:AT1G22530RefSeq:AT1G22530TAIR:AT1G22530RefSeq:AT1G22530-TAIR-GEnsemblPlants:AT1G22530.1
TAIR:AT1G22530.1EMBL:AY091145EMBL:AY133810Unigene:At.25355InterPro:CRAL-TRIO_domInterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_domInterPro:CRAL/TRIO_N_dom_sfncoils:CoilGO:GO:0002020GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794
GO:GO:0005886GO:GO:0007049GO:GO:0008150GO:GO:0008289GO:GO:0009507GO:GO:0009536
GO:GO:0009987GO:GO:0016020GO:GO:0051301InterPro:GOLD_domInterPro:GOLD_dom_sfInterPro:IPR001251
InterPro:IPR009038InterPro:IPR036865RefSeq:NP_173669.1Symbol:PATL2PFAM:PF00650PFAM:PF03765
PO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0005052PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007131
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281PRINTS:PR00180PFscan:PS50191
PFscan:PS50866PANTHER:PTHR23324PANTHER:PTHR23324:SF96UniProt:Q56ZI2SMART:SM00516SMART:SM01100
SUPFAM:SSF101576SUPFAM:SSF46938SUPFAM:SSF52087UniParc:UPI000009F72FSEG:seg:
Description
PATL2Patellin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q56ZI2]
Coordinates
chr1:-:7955445..7958564
Molecular Weight (calculated)
76011.7 Da
IEP (calculated)
4.597
GRAVY (calculated)
-0.533
Length
683 amino acids
Sequence
(BLAST)
001: MAQEEIQKPT ASVPVVKEET PAPVKEVEVP VTTEKAVAAP APEATEEKVV SEVAVPETEV TAVKEEEVAT GKEILQSESF KEEGYLASEL QEAEKNALAE
101: LKELVREALN KREFTAPPPP PAPVKEEKVE EKKTEETEEK KEEVKTEEKS LEAETKEEEK SAAPATVETK KEEILAAPAP IVAETKKEET PVAPAPVETK
201: PAAPVVAETK KEEILPAAPV TTETKVEEKV VPVETTPAAP VTTETKEEEK AAPVTTETKE EEKAAPGETK KEEKATASTQ VKRASKFIKD IFVSVTTSEK
301: KKEEEKPAVV TIEKAFAADQ EEETKTVEAV EESIVSITLP ETAAYVEPEE VSIWGIPLLE DERSDVILLK FLRARDFKVK EAFTMLKNTV QWRKENKIDD
401: LVSEDLEGSE FEKLVFTHGV DKQGHVVIYS SYGEFQNKEI FSDKEKLSKF LKWRIQFQEK CVRSLDFSPE AKSSFVFVSD FRNAPGLGQR ALWQFIKRAV
501: KQFEDNYPEF VAKELFINVP WWYIPYYKTF GSIITSPRTR SKMVLSGPSK SAETIFKYVA PEVVPVKYGG LSKDSPFTVE DGVTEAVVKS TSKYTIDLPA
601: TEGSTLSWEL RVLGADVSYG AQFEPSNEAS YTVIVSKNRK VGLTDEPVIT DSFKASEAGK VVITIDNQTF KKKKVLYRSK TQA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.