CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21368	Canola	cytosol	90.26	86.66
AT1G22530.1	Thale cress	cytosol	76.84	70.42
CDY71842	Canola	cytosol	52.24	67.98
CDY71835	Canola	cytosol	30.51	66.78
CDX68279	Canola	cytosol	52.24	61.58
CDY03655	Canola	cytosol	54.63	60.53
CDX96377	Canola	cytosol	53.51	60.25
CDX82182	Canola	cytosol	54.95	59.83
KRG99105	Soybean	cytosol	11.82	50.0
Zm00001d043169_P001	Maize	cytosol	15.5	45.97
GSMUA_Achr2P08100_001	Banana	cytosol	28.59	45.09
HORVU3Hr1G082150.1	Barley	cytosol	23.32	42.44
CDY58916	Canola	cytosol	9.27	42.03
Solyc06g064940.2.1	Tomato	nucleus	38.5	41.55
GSMUA_Achr7P23220_001	Banana	cytosol	32.91	41.2
Zm00001d041705_P001	Maize	cytosol, mitochondrion	7.03	41.12
Solyc11g051160.1.1	Tomato	extracellular, plastid	38.18	40.58
PGSC0003DMT400013297	Potato	cytosol	37.22	40.38
GSMUA_Achr9P08580_001	Banana	cytosol, plasma membrane	28.91	39.69
Zm00001d012254_P003	Maize	mitochondrion	35.14	39.57
CDY13832	Canola	cytosol, plastid	17.25	38.99
CDX73635	Canola	cytosol, plastid	17.25	38.99
CDY29572	Canola	cytosol, plastid	17.25	38.99
CDX78958	Canola	cytosol, plastid	17.25	38.99
EES10230	Sorghum	cytosol	31.63	38.67
KRH23751	Soybean	endoplasmic reticulum	37.22	38.45
GSMUA_Achr6P18780_001	Banana	cytosol	35.3	38.1
GSMUA_Achr5P25970_001	Banana	cytosol	33.71	38.02
VIT_18s0041g00430.t01	Wine grape	cytosol	36.74	37.95
CDX90715	Canola	cytosol	18.69	37.74
KXG33790	Sorghum	cytosol	35.3	37.46
Zm00001d005249_P001	Maize	mitochondrion	16.45	37.18
Zm00001d005304_P001	Maize	mitochondrion	16.13	37.13
Zm00001d042664_P001	Maize	plasma membrane	33.87	37.13
GSMUA_Achr6P07270_001	Banana	cytosol, nucleus, plastid	30.67	36.92
TraesCS3B01G417500.1	Wheat	golgi	34.03	36.85
TraesCS3A01G385300.1	Wheat	cytosol	33.87	36.68
Os05t0429400-01	Rice	plasma membrane	34.19	36.58
CDX82180	Canola	nucleus	28.27	36.2
KRH44929	Soybean	endoplasmic reticulum	33.23	36.11
Os01t0874700-01	Rice	plasma membrane	35.3	36.05
Zm00001d038262_P001	Maize	plasma membrane	35.62	35.97
OQU78068	Sorghum	cytosol	30.19	35.93
CDY50441	Canola	plasma membrane	27.8	35.88
CDY03654	Canola	nucleus	27.96	35.79
TraesCS1B01G279200.1	Wheat	cytosol	34.66	35.57
GSMUA_Achr3P22170_001	Banana	cytosol	29.71	35.36
TraesCS3D01G378300.1	Wheat	cytosol	33.07	35.26
TraesCS1A01G268500.1	Wheat	cytosol	33.87	34.75
TraesCS1D01G268600.1	Wheat	golgi	33.87	34.75
Zm00001d010205_P002	Maize	cytosol	29.55	34.32
CDX68278	Canola	cytosol	23.48	33.49
HORVU3Hr1G082110.2	Barley	plastid	33.55	32.56
HORVU1Hr1G075150.4	Barley	plasma membrane	34.5	32.53
CDX78026	Canola	cytosol, plastid	20.93	31.8
CDX73705	Canola	cytosol, plastid	20.61	31.31
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	30.83	30.88
CDX90637	Canola	cytosol	19.49	30.35
CDY50723	Canola	nucleus	24.92	29.43
CDY02316	Canola	cytosol	20.13	29.23
CDY09549	Canola	nucleus	24.92	29.16
CDX77578	Canola	cytosol	24.76	29.14
CDY05051	Canola	nucleus	26.36	23.78
CDY29036	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	19.33	20.3

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	GO:A0A078JLA6	UniProt:A0A078JLA6	EnsemblPlants:CDY66581	ProteinID:CDY66581
ProteinID:CDY66581.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	EnsemblPlantsGene:GSBRNA2T00054602001
InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191
PANTHER:PTHR23324	PANTHER:PTHR23324:SF96	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
UniParc:UPI0004EEDA82	SEG:seg	:	:	:	:

Description

BnaC05g50350DBnaC05g50350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JLA6]

Coordinates

chrLK035341:-:5228..7803

Molecular Weight (calculated)

69076.3 Da

IEP (calculated)

4.617

GRAVY (calculated)

-0.536

Length

626 amino acids

Sequence
(BLAST)

001: MAQEEIQKPA ASTTTAPVPA KEETPVVPPV KEVSAPVTTD KSVTAPAPES KEENIVSEKE APVVVEEIVT GKVIAHTESF KEEGYLASEL TEAEKNALAE
101: FKEMVREALN KHEFTAPPPT PAKEETAEEK KTEDTEEVKT DEVAQTKTEE KSAAPTAAET KKEETSAVSP TEETKPAAPA AEEITKEEKP VAPTPVESKP
201: AAPVVTETKK EETPAPVETK PAAPVVAETT KQETPAPVTT ETKKDEKPAP VETKAAAPAT TETKKEEKPA PVETKPAAPV TTETKKEEEK AVTSAPVETK
301: PATPVTTEVV TIEKAFAAEQ EEATKTVEAI EEESIVSITL PETAVSVEPE EVSIWGIPLL EDERSDVILL KFLRARDFKV KEAFTMLKNT VQWRKENNID
401: DLVAEDLQGA EFEKMVFTHG VDKQGHVVIY SSYGEFQNKE IFSDKEKFNK FLKWRIQFQE KCVRSLDFSP EAKSSFVFVS DFRNAPGLGK RSLWQFIRRA
501: VKQFEDNYPE FVAKELFINV PWWYIPYYKT FGNIIISPRT RSKMVLAGPS KTAETIFKYV APEVVPVKYG GLSKESPFTV EDGVTEAVVK SSAKHTIELP
601: ASEGSTLSWE LRVLGAGVIY RFKTQA

Best Arabidopsis Sequence Match ( AT1G22530.1 )
(BLAST)

001: MAQEEIQKPT ASVPVVKEET PAPVKEVEVP VTTEKAVAAP APEATEEKVV SEVAVPETEV TAVKEEEVAT GKEILQSESF KEEGYLASEL QEAEKNALAE
101: LKELVREALN KREFTAPPPP PAPVKEEKVE EKKTEETEEK KEEVKTEEKS LEAETKEEEK SAAPATVETK KEEILAAPAP IVAETKKEET PVAPAPVETK
201: PAAPVVAETK KEEILPAAPV TTETKVEEKV VPVETTPAAP VTTETKEEEK AAPVTTETKE EEKAAPGETK KEEKATASTQ VKRASKFIKD IFVSVTTSEK
301: KKEEEKPAVV TIEKAFAADQ EEETKTVEAV EESIVSITLP ETAAYVEPEE VSIWGIPLLE DERSDVILLK FLRARDFKVK EAFTMLKNTV QWRKENKIDD
401: LVSEDLEGSE FEKLVFTHGV DKQGHVVIYS SYGEFQNKEI FSDKEKLSKF LKWRIQFQEK CVRSLDFSPE AKSSFVFVSD FRNAPGLGQR ALWQFIKRAV
501: KQFEDNYPEF VAKELFINVP WWYIPYYKTF GSIITSPRTR SKMVLSGPSK SAETIFKYVA PEVVPVKYGG LSKDSPFTVE DGVTEAVVKS TSKYTIDLPA
601: TEGSTLSWEL RVLGADVSYG AQFEPSNEAS YTVIVSKNRK VGLTDEPVIT DSFKASEAGK VVITIDNQTF KKKKVLYRSK TQA

Arabidopsis Description

PATL2Patellin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q56ZI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.