CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77578	Canola	cytosol	87.17	86.84
CDY02316	Canola	cytosol	65.09	80.05
CDY09549	Canola	nucleus	79.62	78.88
AT1G30690.2	Thale cress	cytosol	71.32	70.0
KRH11846	Soybean	cytosol	55.09	62.8
KRH36854	Soybean	cytosol	54.34	61.67
VIT_10s0003g05480.t01	Wine grape	cytosol	54.91	61.13
Solyc02g070210.2.1	Tomato	cytosol	48.68	54.78
PGSC0003DMT400054383	Potato	cytosol	48.3	54.47
GSMUA_Achr9P30580_001	Banana	cytosol	51.32	50.0
EER88801	Sorghum	cytosol	47.92	48.66
Zm00001d046995_P001	Maize	plasma membrane	47.55	47.64
CDX90715	Canola	cytosol	27.74	47.42
HORVU7Hr1G107070.1	Barley	cytosol	45.28	44.36
TraesCS7A01G466800.1	Wheat	cytosol	46.23	44.14
CDY13832	Canola	cytosol, plastid	23.02	44.04
CDY29572	Canola	cytosol, plastid	23.02	44.04
CDX78958	Canola	cytosol, plastid	23.02	44.04
CDX73635	Canola	cytosol, plastid	23.02	44.04
TraesCS7B01G368100.1	Wheat	nucleus	46.79	43.82
TraesCS7D01G454600.1	Wheat	cytosol	47.17	43.71
CDX78026	Canola	cytosol, plastid	33.4	42.96
CDX73705	Canola	cytosol, plastid	33.02	42.48
Os06t0671800-01	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	28.49	41.6
CDY58916	Canola	cytosol	10.75	41.3
CDX90637	Canola	cytosol	31.13	41.04
CDY03654	Canola	nucleus	36.42	39.47
CDX82180	Canola	nucleus	36.42	39.47
CDY50441	Canola	plasma membrane	36.04	39.38
CDX68278	Canola	cytosol	31.13	37.59
CDX68279	Canola	cytosol	32.83	32.77
CDX96377	Canola	cytosol	33.96	32.37
CDY03655	Canola	cytosol	33.58	31.5
CDX82182	Canola	cytosol	33.96	31.3
CDY71835	Canola	cytosol	16.23	30.07
CDY71842	Canola	cytosol	26.6	29.31
CDY29036	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	31.13	27.68
CDY21368	Canola	cytosol	32.26	26.23
CDY05051	Canola	nucleus	34.34	26.22
CDY66581	Canola	cytosol	29.43	24.92

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	GO:A0A078INQ5	UniProt:A0A078INQ5	EnsemblPlants:CDY50723	ProteinID:CDY50723
ProteinID:CDY50723.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil
InterPro:GOLD_dom	InterPro:GOLD_dom_sf	EnsemblPlantsGene:GSBRNA2T00097315001	InterPro:IPR001251	InterPro:IPR009038	InterPro:IPR036865
PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PFscan:PS50866	PANTHER:PTHR23324	PANTHER:PTHR23324:SF139
SMART:SM00516	SMART:SM01100	SUPFAM:SSF101576	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0004EECC46
SEG:seg	:	:	:	:	:

Description

BnaA05g35500DBnaA05g35500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078INQ5]

Coordinates

chrLK032934:+:45344..47936

Molecular Weight (calculated)

59896.6 Da

IEP (calculated)

4.507

GRAVY (calculated)

-0.561

Length

530 amino acids

Sequence
(BLAST)

001: MTAEVKVEEK QVESEDEVKA VEEVDGSETK VVEKISSFKE ESDFFSDLKD SEKKALSDLK TKLEEAIVEN TLFRKKKETP VKVTDAVVTE EAKAETTEDV
101: VQKESPKEEV KTEADVVDTK EEVKAEIAEE EKKTEEAVVT KEADVVDTKE EVKAEIAEEE KKSEEAVVTK EATVEQEEED EIVDNDIELW GVPLLPSKGA
201: EGTDVILLKF LRARDFKVND AFEMLKKTLK WRKEQKINSV LGRDFGEDLA SAAYMNGLDR ESRPVCYNVY SVFGNEELYQ ATFGSEQTRE NLLKWRFQLM
301: EKGTQKLDLK PGGVTSLLQI HDLKNCPGPL KKELWVAIKN AIVALQDNYP ELVSRNVFIN VPFWFYAVST LLSPFLTQRT KSKFVVPRPA NVTETLLKYI
401: PAEEIPVQYG GFKRDDDTEF SKEAVSEVVV KPGSSETIEI PATETEGTLV WDVAVLGWEV NYKEEFVPAD EGAYTIIVQK VKKIGSNEGP VRNSFKNSES
501: GKIVLTVDNV SSKKKKRVLY RYRTKTESSC

Best Arabidopsis Sequence Match ( AT1G30690.2 )
(BLAST)

001: MTAEVKVEEK QVESEVVIAP AVVPEETTVK AVVEETKVEE DESKPEGVEK SASFKEESDF FADLKESEKK ALSDLKSKLE EAIVDNTLLK TKKKESSPMK
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS

Arabidopsis Description

PATL4Patellin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q94C59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.