CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71835	Canola	cytosol	53.22	89.51
Bra016084.1-P	Field mustard	cytosol	93.56	80.65
CDX96377	Canola	cytosol	92.93	80.4
CDY03655	Canola	cytosol	87.94	74.87
CDX68279	Canola	cytosol	82.33	74.58
CDX82182	Canola	cytosol	87.53	73.22
AT1G72150.1	Thale cress	cytosol	81.7	68.59
CDY66581	Canola	cytosol	67.98	52.24
CDY21368	Canola	cytosol	65.28	48.16
KRG99105	Soybean	cytosol	14.55	47.3
GSMUA_Achr2P08100_001	Banana	cytosol	34.51	41.81
Zm00001d043169_P001	Maize	cytosol	18.09	41.23
Solyc11g051160.1.1	Tomato	extracellular, plastid	48.44	39.56
GSMUA_Achr7P23220_001	Banana	cytosol	40.33	38.8
HORVU3Hr1G082150.1	Barley	cytosol	27.44	38.37
CDX73635	Canola	cytosol, plastid	22.04	38.27
CDY13832	Canola	cytosol, plastid	22.04	38.27
CDX78958	Canola	cytosol, plastid	22.04	38.27
CDY29572	Canola	cytosol, plastid	22.04	38.27
Solyc06g064940.2.1	Tomato	nucleus	45.53	37.76
GSMUA_Achr9P08580_001	Banana	cytosol, plasma membrane	35.76	37.72
CDY58916	Canola	cytosol	10.81	37.68
EES10230	Sorghum	cytosol	39.5	37.11
PGSC0003DMT400013297	Potato	cytosol	44.28	36.92
GSMUA_Achr6P18780_001	Banana	cytosol	43.45	36.03
VIT_18s0041g00430.t01	Wine grape	cytosol	45.11	35.81
Zm00001d012254_P003	Maize	mitochondrion	40.96	35.43
CDX82180	Canola	nucleus	35.76	35.17
CDY50441	Canola	plasma membrane	35.34	35.05
CDY03654	Canola	nucleus	35.55	34.97
KRH23751	Soybean	endoplasmic reticulum	43.66	34.65
GSMUA_Achr5P25970_001	Banana	cytosol	39.92	34.59
GSMUA_Achr6P07270_001	Banana	cytosol, nucleus, plastid	37.21	34.42
KRH44929	Soybean	endoplasmic reticulum	40.96	34.2
CDX90715	Canola	cytosol	21.83	33.87
Zm00001d042664_P001	Maize	plasma membrane	39.92	33.63
TraesCS3A01G385300.1	Wheat	cytosol	40.33	33.56
TraesCS3B01G417500.1	Wheat	golgi	40.33	33.56
GSMUA_Achr3P22170_001	Banana	cytosol	36.59	33.46
Zm00001d005304_P001	Maize	mitochondrion	18.92	33.46
KXG33790	Sorghum	cytosol	40.96	33.39
TraesCS3D01G378300.1	Wheat	cytosol	40.33	33.05
Os01t0874700-01	Rice	plasma membrane	41.58	32.63
CDX68278	Canola	cytosol	29.73	32.57
Os05t0429400-01	Rice	plasma membrane	39.29	32.31
Zm00001d005249_P001	Maize	mitochondrion	18.5	32.13
OQU78068	Sorghum	cytosol	35.14	32.13
Zm00001d038262_P001	Maize	plasma membrane	40.96	31.77
TraesCS1B01G279200.1	Wheat	cytosol	39.71	31.31
TraesCS1D01G268600.1	Wheat	golgi	39.29	30.98
Zm00001d041705_P001	Maize	cytosol, mitochondrion	6.86	30.84
TraesCS1A01G268500.1	Wheat	cytosol	39.09	30.82
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	38.67	29.76
Zm00001d010205_P002	Maize	cytosol	33.26	29.68
HORVU3Hr1G082110.2	Barley	plastid	39.71	29.61
CDX78026	Canola	cytosol, plastid	25.16	29.37
CDX73705	Canola	cytosol, plastid	24.95	29.13
HORVU1Hr1G075150.4	Barley	plasma membrane	39.29	28.46
CDX90637	Canola	cytosol	23.49	28.11
CDX77578	Canola	cytosol	29.52	26.69
CDY50723	Canola	nucleus	29.31	26.6
CDY09549	Canola	nucleus	29.52	26.54
CDY02316	Canola	cytosol	23.7	26.45
CDY05051	Canola	nucleus	31.81	22.05
CDY29036	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	23.08	18.62

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A078K1R2	EnsemblPlants:CDY71842	ProteinID:CDY71842	ProteinID:CDY71842.1
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	EnsemblPlantsGene:GSBRNA2T00020680001
InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324
PANTHER:PTHR23324:SF96	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0004EDC5BB
SEG:seg	:	:	:	:	:

Description

BnaC06g43790DBnaC06g43790D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K1R2]

Coordinates

chrLK047763:+:577..2389

Molecular Weight (calculated)

53690.1 Da

IEP (calculated)

4.447

GRAVY (calculated)

-0.619

Length

481 amino acids

Sequence
(BLAST)

001: MAQEEAQKSA DVVVVSTEKP MTDDKEVTVP APVPEKEVTP PVASEEKAVP EKVAVETEAE KAAPVKEEET VVAEKVIAPS PEELEKKALE EFKELVREAL
101: NKREFTAPAT PPVKEEKAEE KKPAEETKEE EKEKKEEEKA TVPAQEEAVK SGEKPSEPAA APAETKPEEK EVVPVTTEKA SGAEEDGTKT VEAIEESIVS
201: VTPQESTAAP EETTVVAEAE PVEPEEVSIY GVPLLQDERS DVILLKFLRA RDFKVKEALT MLKNTVQWRK ENKIDELVEA EAGEEASEFE KMVFAHGVDK
301: EGHVVIYSSY GEFQNKELFS DKEKLNKFLN WRIQLQEKCV RALDFSSPDA KSSFVFVSDF RNAPGLGKRA LWQFIRRAVK QFEDNYPEFA TRELFINVPW
401: WYIPYYKTFG SIITSPRTRS KMVLAGPSKS TDTIFKYISP EQVPVKYGGL SKDIPSTNGD TVTEAIVKPA AKYTIELPAS E

Best Arabidopsis Sequence Match ( AT1G72150.1 )
(BLAST)

001: MAQEEVQKSA DVAAAPVVKE KPITDKEVTI PTPVAEKEEV AAPVSDEKAV PEKEVTPEKE APAAEAEKSV SVKEEETVVV AEKVVVLTAE EVQKKALEEF
101: KELVREALNK REFTAPVTPV KEEKTEEKKT EEETKEEEKT EEKKEETTTE VKVEEEKPAV PAAEEEKSSE AAPVETKSEE KPEEKAEVTT EKASSAEEDG
201: TKTVEAIEES IVSVSPPESA VAPVVVETVA VAEAEPVEPE EVSIWGVPLL QDERSDVILT KFLRARDFKV KEALTMLKNT VQWRKENKID ELVESGEEVS
301: EFEKMVFAHG VDKEGHVVIY SSYGEFQNKE LFSDKEKLNK FLSWRIQLQE KCVRAIDFSN PEAKSSFVFV SDFRNAPGLG KRALWQFIRR AVKQFEDNYP
401: EFAAKELFIN VPWWYIPYYK TFGSIITSPR TRSKMVLAGP SKSADTIFKY IAPEQVPVKY GGLSKDTPLT EETITEAIVK PAANYTIELP ASEACTLSWE
501: LRVLGADVSY GAQFEPTTEG SYAVIVSKTR KIGSTDEPVI TDSFKVGEPG KIVITIDNQT SKKKKVLYRF KTQ

Arabidopsis Description

PATL1Patellin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q56WK6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.