Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G72160.1 | KXG22896 | AT3G54220.1 | 19228333 |
| AT1G72160.1 | OQU82754 | AT3G54220.1 | 19228333 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d041705_P001 | Maize | cytosol, mitochondrion | 17.68 | 86.92 |
| Zm00001d043169_P001 | Maize | cytosol | 33.84 | 84.36 |
| Zm00001d005249_P001 | Maize | mitochondrion | 42.59 | 80.87 |
| Zm00001d005304_P001 | Maize | mitochondrion | 41.25 | 79.78 |
| Zm00001d038262_P001 | Maize | plasma membrane | 81.94 | 69.52 |
| VIT_09s0002g09040.t01 | Wine grape | cytosol | 14.83 | 68.42 |
| Os05t0429400-01 | Rice | plasma membrane | 72.24 | 64.96 |
| TraesCS1A01G268500.1 | Wheat | cytosol | 72.43 | 62.46 |
| KXG33790 | Sorghum | cytosol | 69.01 | 61.53 |
| TraesCS1D01G268600.1 | Wheat | golgi | 71.29 | 61.48 |
| TraesCS1B01G279200.1 | Wheat | cytosol | 70.91 | 61.15 |
| EES10230 | Sorghum | cytosol | 58.94 | 60.55 |
| KRG99105 | Soybean | cytosol | 16.54 | 58.78 |
| Zm00001d010205_P002 | Maize | cytosol | 57.41 | 56.03 |
| Bra000675.1-P | Field mustard | cytosol | 32.51 | 55.16 |
| HORVU1Hr1G075150.4 | Barley | plasma membrane | 69.2 | 54.82 |
| CDX90715 | Canola | cytosol | 32.13 | 54.52 |
| GSMUA_Achr7P23220_001 | Banana | cytosol | 49.24 | 51.8 |
| GSMUA_Achr5P25970_001 | Banana | cytosol | 53.23 | 50.45 |
| GSMUA_Achr6P18780_001 | Banana | cytosol | 54.18 | 49.14 |
| CDY58916 | Canola | cytosol | 12.74 | 48.55 |
| GSMUA_Achr3P22170_001 | Banana | cytosol | 47.91 | 47.91 |
| KRH23753 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 38.02 | 47.17 |
| VIT_05s0029g01570.t01 | Wine grape | cytosol | 35.74 | 46.77 |
| VIT_07s0031g03220.t01 | Wine grape | cytosol | 44.87 | 45.21 |
| KRH59683 | Soybean | cytosol | 45.25 | 44.16 |
| KRH63933 | Soybean | plasma membrane | 45.44 | 42.91 |
| KRH54012 | Soybean | nucleus | 45.44 | 42.91 |
| KRH41016 | Soybean | endoplasmic reticulum | 45.82 | 41.91 |
| Solyc11g027880.1.1 | Tomato | cytosol, endoplasmic reticulum, plastid | 38.97 | 41.84 |
| PGSC0003DMT400065886 | Potato | cytosol | 38.97 | 41.75 |
| VIT_18s0041g00430.t01 | Wine grape | cytosol | 48.1 | 41.75 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, plastid | 48.67 | 40.96 |
| KRH23751 | Soybean | endoplasmic reticulum | 47.15 | 40.92 |
| CDY50441 | Canola | plasma membrane | 37.07 | 40.21 |
| CDY03654 | Canola | nucleus | 37.07 | 39.88 |
| AT1G72160.1 | Thale cress | nucleus | 37.07 | 39.8 |
| Bra008013.1-P | Field mustard | nucleus | 37.45 | 39.72 |
| CDX82180 | Canola | nucleus | 36.88 | 39.67 |
| Solyc11g051160.1.1 | Tomato | extracellular, plastid | 44.11 | 39.39 |
| Solyc06g064940.2.1 | Tomato | nucleus | 43.35 | 39.31 |
| KRH44929 | Soybean | endoplasmic reticulum | 42.97 | 39.24 |
| PGSC0003DMT400013297 | Potato | cytosol | 42.97 | 39.17 |
| Bra003891.1-P | Field mustard | cytosol | 37.26 | 38.89 |
| VIT_18s0041g00420.t01 | Wine grape | cytosol | 42.02 | 37.97 |
| CDX68279 | Canola | cytosol | 38.02 | 37.66 |
| Bra003892.1-P | Field mustard | cytosol | 37.26 | 37.55 |
| EES18028 | Sorghum | plastid | 30.61 | 37.35 |
| CDX68278 | Canola | cytosol | 30.99 | 37.13 |
| CDX96377 | Canola | cytosol | 38.97 | 36.87 |
| Bra016084.1-P | Field mustard | cytosol | 38.97 | 36.74 |
| Bra008012.1-P | Field mustard | cytosol | 39.16 | 36.65 |
| CDY03655 | Canola | cytosol | 38.97 | 36.28 |
| CDX82182 | Canola | cytosol | 38.97 | 35.65 |
| AT1G72150.1 | Thale cress | cytosol | 38.59 | 35.43 |
| CDY71842 | Canola | cytosol | 32.13 | 35.14 |
| EER88801 | Sorghum | cytosol | 34.22 | 34.48 |
| CDY71835 | Canola | cytosol | 18.06 | 33.22 |
| Bra040854.1-P | Field mustard | cytosol | 41.63 | 31.02 |
| CDY21368 | Canola | cytosol | 38.02 | 30.67 |
| CDY66581 | Canola | cytosol | 35.93 | 30.19 |
| AT1G22530.1 | Thale cress | cytosol | 39.16 | 30.16 |
| AT4G09160.1 | Thale cress | cytosol | 36.5 | 28.74 |
| CDY05051 | Canola | nucleus | 36.31 | 27.52 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.1 | UniProt:A0A1Z5R2Q7 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR001251 | InterPro:IPR036865 |
| EnsemblPlants:OQU78068 | ProteinID:OQU78068 | ProteinID:OQU78068.1 | PFAM:PF00650 | PFAM:PF03765 | PFscan:PS50191 |
| PANTHER:PTHR23324 | PANTHER:PTHR23324:SF143 | SMART:SM00516 | SMART:SM01100 | EnsemblPlantsGene:SORBI_3009G147800 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | TMHMM:TMhelix | UniParc:UPI000B8BA57D | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr9:-:50483173..50486360
Molecular Weight (calculated)
58572.6 Da
IEP (calculated)
4.403
GRAVY (calculated)
-0.365
Length
526 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAKEEAPA AAKEDEPKAE EAVAEEPVKE EAKPEEPKTE APAEVAAAEE AKDEAPAPEE PKTKAPAPEE PKTEAPAPEE PAKEEPKAEA AAEAVAEEPK
101: AEAATEETKP AEPEPEEKTV VVAEEEATKT VEAIEETVAA ATAVEPEAES ALAQVAEPKE ELIWGVPLVG DDERTDTVLL KFLRAREFKV KEALAMLKSA
201: VLWRKRFGID EVLGADLGLP ELENVVFYRG ADREGHPVCY NVYGEFQDKE LYEKAFGDEE KRERFLKWRI QLLERGIREQ LDFSPSGICS MVQVTDLKNS
301: PPMLGKHRAV TRQALALLQD NYPEFVAKKV FINVPWWYLA ANKVMSPFLT QRTKSKIVFC SPGKSAETLF RYIAPEQVPV QFGGLYKEDD TEFSTSDAVT
401: ELTVKPSSKE TIEIPATENS TVVWELRVLG WEVSYGAEFT PDAEGGYTVI VQKTRKVPAH EEPIMKGSFK VTEPVLCLGS LIICWLAVLF WGRICMSLVA
501: LLVSKKFYKI FQILRHIESL DVCIKY
101: AEAATEETKP AEPEPEEKTV VVAEEEATKT VEAIEETVAA ATAVEPEAES ALAQVAEPKE ELIWGVPLVG DDERTDTVLL KFLRAREFKV KEALAMLKSA
201: VLWRKRFGID EVLGADLGLP ELENVVFYRG ADREGHPVCY NVYGEFQDKE LYEKAFGDEE KRERFLKWRI QLLERGIREQ LDFSPSGICS MVQVTDLKNS
301: PPMLGKHRAV TRQALALLQD NYPEFVAKKV FINVPWWYLA ANKVMSPFLT QRTKSKIVFC SPGKSAETLF RYIAPEQVPV QFGGLYKEDD TEFSTSDAVT
401: ELTVKPSSKE TIEIPATENS TVVWELRVLG WEVSYGAEFT PDAEGGYTVI VQKTRKVPAH EEPIMKGSFK VTEPVLCLGS LIICWLAVLF WGRICMSLVA
501: LLVSKKFYKI FQILRHIESL DVCIKY
001: MSQDSATTTP PPPLTSDVSM PSGEEDEPKH VTSEEEAPVT SETNLKLPLM PELEESNHTA EVVSEKVTPE TMTLESEGLN HAAEDSEQTH EVTPETETAK
101: LEVLNHTAED SEQTHEVTPE KETVKSEFLN HVAEDSEQTH EVTPETETVK SEVLNHAAED SEQPRGVTPT PETETSEADT SLLVTSETEE PNHAAEDYSE
201: TEPSQKLMLE QRRKYMEVED WTEPELPDEA VLEAAASVPE PKQPEPQTPP PPPSTTTSTV ASRSLAEMMN REEAEVEEKQ KIQIPRSLGS FKEETNKISD
301: LSETELNALQ ELRHLLQVSQ DSSKTSIWGV PLLKDDRTDV VLLKFLRARD FKPQEAYSML NKTLQWRIDF NIEELLDENL GDDLDKVVFM QGQDKENHPV
401: CYNVYGEFQN KDLYQKTFSD EEKRERFLRW RIQFLEKSIR NLDFVAGGVS TICQVNDLKN SPGPGKTELR LATKQALHLL QDNYPEFVSK QIFINVPWWY
501: LAFYRIISPF MSQRSKSKLV FAGPSRSAET LLKYISPEHV PVQYGGLSVD NCECNSDFTH DDIATEITVK PTTKQTVEII VYEKCTIVWE IRVVGWEVSY
601: GAEFVPENKE GYTVIIQKPR KMTAKNELVV SHSFKVGEVG RILLTVDNPT STKKMLIYRF KVKPLACE
101: LEVLNHTAED SEQTHEVTPE KETVKSEFLN HVAEDSEQTH EVTPETETVK SEVLNHAAED SEQPRGVTPT PETETSEADT SLLVTSETEE PNHAAEDYSE
201: TEPSQKLMLE QRRKYMEVED WTEPELPDEA VLEAAASVPE PKQPEPQTPP PPPSTTTSTV ASRSLAEMMN REEAEVEEKQ KIQIPRSLGS FKEETNKISD
301: LSETELNALQ ELRHLLQVSQ DSSKTSIWGV PLLKDDRTDV VLLKFLRARD FKPQEAYSML NKTLQWRIDF NIEELLDENL GDDLDKVVFM QGQDKENHPV
401: CYNVYGEFQN KDLYQKTFSD EEKRERFLRW RIQFLEKSIR NLDFVAGGVS TICQVNDLKN SPGPGKTELR LATKQALHLL QDNYPEFVSK QIFINVPWWY
501: LAFYRIISPF MSQRSKSKLV FAGPSRSAET LLKYISPEHV PVQYGGLSVD NCECNSDFTH DDIATEITVK PTTKQTVEII VYEKCTIVWE IRVVGWEVSY
601: GAEFVPENKE GYTVIIQKPR KMTAKNELVV SHSFKVGEVG RILLTVDNPT STKKMLIYRF KVKPLACE
Arabidopsis Description
PATL5Patellin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.