Factsheet for Bra003892.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68279	Canola	cytosol	95.59	93.97
Bra016084.1-P	Field mustard	cytosol	85.06	79.57
Bra008012.1-P	Field mustard	cytosol	82.95	77.05
AT1G72150.1	Thale cress	cytosol	79.89	72.77
Bra040854.1-P	Field mustard	cytosol	68.97	50.99
GSMUA_Achr2P08100_001	Banana	cytosol	37.93	49.87
Zm00001d041705_P001	Maize	cytosol, mitochondrion	9.96	48.6
KRG99105	Soybean	cytosol	13.03	45.95
HORVU3Hr1G082150.1	Barley	cytosol	29.69	45.06
GSMUA_Achr7P23220_001	Banana	cytosol	42.34	44.2
GSMUA_Achr9P08580_001	Banana	cytosol, plasma membrane	38.12	43.64
Bra000675.1-P	Field mustard	cytosol	25.86	43.55
Solyc11g051160.1.1	Tomato	extracellular, plastid	47.13	41.77
Zm00001d005249_P001	Maize	mitochondrion	22.03	41.52
Zm00001d043169_P001	Maize	cytosol	16.67	41.23
Zm00001d005304_P001	Maize	mitochondrion	21.26	40.81
PGSC0003DMT400013297	Potato	cytosol	44.83	40.55
Solyc06g064940.2.1	Tomato	nucleus	45.02	40.52
Zm00001d012254_P003	Maize	mitochondrion	43.1	40.47
GSMUA_Achr6P18780_001	Banana	cytosol	44.83	40.34
Bra008013.1-P	Field mustard	nucleus	37.93	39.92
VIT_18s0041g00430.t01	Wine grape	cytosol	46.17	39.77
GSMUA_Achr5P25970_001	Banana	cytosol	42.15	39.64
Bra003891.1-P	Field mustard	cytosol	37.55	38.89
EES10230	Sorghum	cytosol	38.12	38.87
GSMUA_Achr6P07270_001	Banana	cytosol, nucleus, plastid	38.7	38.85
KRH23751	Soybean	endoplasmic reticulum	45.02	38.78
KRH44929	Soybean	endoplasmic reticulum	42.72	38.72
Zm00001d042664_P001	Maize	plasma membrane	41.57	38.0
KXG33790	Sorghum	cytosol	42.72	37.8
Os05t0429400-01	Rice	plasma membrane	41.76	37.27
OQU78068	Sorghum	cytosol	37.55	37.26
GSMUA_Achr3P22170_001	Banana	cytosol	37.36	37.07
TraesCS3A01G385300.1	Wheat	cytosol	41.0	37.02
TraesCS3B01G417500.1	Wheat	golgi	41.0	37.02
Os01t0874700-01	Rice	plasma membrane	43.1	36.7
TraesCS3D01G378300.1	Wheat	cytosol	41.0	36.46
Zm00001d038262_P001	Maize	plasma membrane	42.53	35.81
TraesCS1B01G279200.1	Wheat	cytosol	41.0	35.08
TraesCS1D01G268600.1	Wheat	golgi	40.8	34.92
TraesCS1A01G268500.1	Wheat	cytosol	40.23	34.43
Bra036782.1-P	Field mustard	cytosol, plastid	27.01	34.22
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	40.23	33.6
Zm00001d010205_P002	Maize	cytosol	34.48	33.4
HORVU3Hr1G082110.2	Barley	plastid	40.42	32.71
HORVU1Hr1G075150.4	Barley	plasma membrane	40.23	31.63
Bra026229.1-P	Field mustard	cytosol	30.84	30.26
Bra012843.1-P	Field mustard	cytosol	25.1	29.64
Bra023118.1-P	Field mustard	cytosol	27.78	29.53

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlantsGene:Bra003892	EnsemblPlants:Bra003892.1	EnsemblPlants:Bra003892.1-P	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:GOLD_dom	InterPro:IPR001251	InterPro:IPR009038
InterPro:IPR036865	UniProt:M4CI59	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PFscan:PS50866
PANTHER:PTHR23324	PANTHER:PTHR23324:SF96	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
UniParc:UPI0002541813	SEG:seg	:	:	:	:

Description

AT1G72150 (E=3e-181) PATL1 | PATL1 (PATELLIN 1); transporter

Coordinates

chrA07:-:15597720..15599966

Molecular Weight (calculated)

58665.9 Da

IEP (calculated)

4.466

GRAVY (calculated)

-0.578

Length

522 amino acids

Sequence
(BLAST)

001: MAQEEAHKTA DVVVTAAEKP MTDKEVTVPP PVAEKDVTPT VASGEKAESE KEEEETVVAE KVIVPSPEEL EKKALAEFKE LVREALNKRE FTSPAPVKEE
101: KPEEKKPAEE TKGEDKTEEK KEEEKPEAIK LEEKTDAVAP AETKSEEKEA VSATEKDSSV EEDGTKTVEA IEESIVSVTP PENTVVSEAE PMEPEEVSIY
201: GVPLLQDERS GVILLKFLRA RDFKVKDALT MLKNTVQWRK ENKIDELVEE ASEFEKMVFA HGVDKEGHVV IYSSYGEFQN KEIFSDKEKL NRFLNWRIQL
301: QEKCVRALDF SSPDAKSSFV FVSDFRNAPG LGKRALWQFI RRAVKQFEDN YPEFASRELF VNVPWWYIPY YKTFGSIITS PRTRSKMVLA GPSKSADTIF
401: KYISPEQVPV KYGGLSKYIP IATEDTVTEA IVKPAAKYTI DLPASDACML SWELRVLGAD VSYGAQFEPT TEGSYAVIVS KNRRIESTDE PVITESFKVG
501: EPGKIDFQEE ESALQVQNST NI

Best Arabidopsis Sequence Match ( AT1G72150.1 )
(BLAST)

001: MAQEEVQKSA DVAAAPVVKE KPITDKEVTI PTPVAEKEEV AAPVSDEKAV PEKEVTPEKE APAAEAEKSV SVKEEETVVV AEKVVVLTAE EVQKKALEEF
101: KELVREALNK REFTAPVTPV KEEKTEEKKT EEETKEEEKT EEKKEETTTE VKVEEEKPAV PAAEEEKSSE AAPVETKSEE KPEEKAEVTT EKASSAEEDG
201: TKTVEAIEES IVSVSPPESA VAPVVVETVA VAEAEPVEPE EVSIWGVPLL QDERSDVILT KFLRARDFKV KEALTMLKNT VQWRKENKID ELVESGEEVS
301: EFEKMVFAHG VDKEGHVVIY SSYGEFQNKE LFSDKEKLNK FLSWRIQLQE KCVRAIDFSN PEAKSSFVFV SDFRNAPGLG KRALWQFIRR AVKQFEDNYP
401: EFAAKELFIN VPWWYIPYYK TFGSIITSPR TRSKMVLAGP SKSADTIFKY IAPEQVPVKY GGLSKDTPLT EETITEAIVK PAANYTIELP ASEACTLSWE
501: LRVLGADVSY GAQFEPTTEG SYAVIVSKTR KIGSTDEPVI TDSFKVGEPG KIVITIDNQT SKKKKVLYRF KTQ

Arabidopsis Description

PATL1Patellin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q56WK6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.