Factsheet for HORVU3Hr1G082110.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G045920.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G72160.1	HORVU5Hr1G045920.2	AT3G54220.1	19228333

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G082150.1	Barley	cytosol	53.33	100.0
TraesCS3B01G417500.1	Wheat	golgi	84.96	94.81
TraesCS3A01G385300.1	Wheat	cytosol	84.81	94.64
TraesCS3D01G378300.1	Wheat	cytosol	84.96	93.36
Os01t0874700-01	Rice	plasma membrane	74.57	78.47
Zm00001d012254_P003	Maize	mitochondrion	67.13	77.88
KXG33790	Sorghum	cytosol	71.16	77.8
Zm00001d042664_P001	Maize	plasma membrane	67.13	75.83
EES10230	Sorghum	cytosol	58.45	73.63
GSMUA_Achr7P23220_001	Banana	cytosol	50.7	65.4
VIT_09s0002g09040.t01	Wine grape	cytosol	11.47	64.91
HORVU1Hr1G075150.4	Barley	plasma membrane	64.5	62.65
KRG99105	Soybean	cytosol	13.8	60.14
GSMUA_Achr6P18780_001	Banana	cytosol	53.64	59.66
GSMUA_Achr3P22170_001	Banana	cytosol	48.06	58.94
GSMUA_Achr5P25970_001	Banana	cytosol	49.61	57.66
Bra000675.1-P	Field mustard	cytosol	27.44	57.1
CDX90715	Canola	cytosol	26.82	55.81
KRH23753	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	35.66	54.25
KRH54012	Soybean	nucleus	44.03	50.99
KRH63933	Soybean	plasma membrane	43.72	50.63
VIT_07s0031g03220.t01	Wine grape	cytosol	40.78	50.38
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	47.75	49.28
Solyc11g027880.1.1	Tomato	cytosol, endoplasmic reticulum, plastid	37.21	48.98
PGSC0003DMT400065886	Potato	cytosol	37.21	48.88
KRH59683	Soybean	cytosol	40.78	48.79
VIT_18s0041g00430.t01	Wine grape	cytosol	45.74	48.68
CDY58916	Canola	cytosol	10.23	47.83
AT1G72160.1	Thale cress	nucleus	36.12	47.55
CDY50441	Canola	plasma membrane	35.66	47.42
KRH23751	Soybean	endoplasmic reticulum	44.5	47.36
CDY03654	Canola	nucleus	35.81	47.24
CDX82180	Canola	nucleus	35.81	47.24
KRH44929	Soybean	endoplasmic reticulum	42.17	47.22
Bra008013.1-P	Field mustard	nucleus	36.28	47.18
VIT_05s0029g01570.t01	Wine grape	cytosol	29.3	47.01
Bra003891.1-P	Field mustard	cytosol	36.28	46.43
PGSC0003DMT400013297	Potato	cytosol	41.24	46.1
KRH41016	Soybean	endoplasmic reticulum	41.09	46.09
Solyc06g064940.2.1	Tomato	nucleus	41.4	46.03
Solyc11g051160.1.1	Tomato	extracellular, plastid	41.4	45.33
CDX68278	Canola	cytosol	30.85	45.33
VIT_18s0041g00420.t01	Wine grape	cytosol	40.62	45.02
CDY71835	Canola	cytosol	18.91	42.66
Bra008012.1-P	Field mustard	cytosol	37.05	42.53
CDX96377	Canola	cytosol	36.59	42.45
CDY03655	Canola	cytosol	37.05	42.3
Bra016084.1-P	Field mustard	cytosol	36.59	42.29
CDX68279	Canola	cytosol	34.57	42.0
CDX82182	Canola	cytosol	36.28	40.7
AT1G72150.1	Thale cress	cytosol	35.97	40.49
Bra003892.1-P	Field mustard	cytosol	32.71	40.42
CDY71842	Canola	cytosol	29.61	39.71
HORVU7Hr1G107070.1	Barley	cytosol	31.47	37.52
AT1G22530.1	Thale cress	cytosol	38.76	36.6
CDY21368	Canola	cytosol	35.19	34.82
Bra040854.1-P	Field mustard	cytosol	37.98	34.7
CDY66581	Canola	cytosol	32.56	33.55
AT4G09160.1	Thale cress	cytosol	34.11	32.93
CDY05051	Canola	nucleus	34.42	31.99
HORVU1Hr1G051510.3	Barley	plastid	14.57	20.09

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A287LY20	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:GOLD_dom	InterPro:GOLD_dom_sf	EnsemblPlantsGene:HORVU3Hr1G082110	EnsemblPlants:HORVU3Hr1G082110.2	InterPro:IPR001251
InterPro:IPR009038	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PFscan:PS50866
PANTHER:PTHR23324	PANTHER:PTHR23324:SF143	SMART:SM00516	SMART:SM01100	SUPFAM:SSF101576	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI000B46E8D1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:597723717..597793672

Molecular Weight (calculated)

69937.3 Da

IEP (calculated)

4.416

GRAVY (calculated)

-0.420

Length

645 amino acids

Sequence
(BLAST)

001: PPHSDSLAPP PPPSPSLYLS SPNPSPSTTP QAFSLYLPPS LPCSPPSLSP ALSFFLHRKS LKQLAEMAEE PQPQAAAPEV VVAEKAPAEV EKXAEEPAAT
101: DAAEAEAEET AAVADDGGAV EATGSFKEES NLVADLPDPE KKALDEFKEL IVAALAAGEF NLPPPPPPPK AKAEAAAEET KTEAPAKEEA KTEEPAKAEE
201: PAEEPKADEP AKEEPKAEVA AEPAAEEAKA EVAAVAAAEE PAKEEPKAEE DKPAEPKKEV EAAVVVAEEG TKTAEPVEEV AATTEQAPAA EAEAEAAAPE
301: PVFIWGVPLV GDDERTDAVL LKFLRAREFK VKEAMAMLRS AVLWRKRFGI ESLLEADLAF PELEKVVFYR GADREGHPVC YNVYGEFQDK EVYEKAFGDE
401: EKRERFLKWR IQLLERGILS QLDFAPSGTC SMVQVTDLKN SPPMLGKHRA VTRQAVALLQ DNYPEFIAKK VFINVPWWYL AANKMMSPFL TQRTKSKFVF
501: ASQAKSPETL FRYIAPEQVP VQFGGLFKED DPDFTTSDSV TELTIKASSK EAIEIPVTEN STIVWELRVL GWEVSYGAEF TPDAEGAYTV IVQKTRKVPA
601: NEEPIMKGSF KASEAGKIVL TISNAASKKK KLLYRSKVKS SGESV

Best Arabidopsis Sequence Match ( AT4G09160.1 )
(BLAST)

001: MSQDSATTTP PPPLTSDVSM PSGEEDEPKH VTSEEEAPVT SETNLKLPLM PELEESNHTA EVVSEKVTPE TMTLESEGLN HAAEDSEQTH EVTPETETAK
101: LEVLNHTAED SEQTHEVTPE KETVKSEFLN HVAEDSEQTH EVTPETETVK SEVLNHAAED SEQPRGVTPT PETETSEADT SLLVTSETEE PNHAAEDYSE
201: TEPSQKLMLE QRRKYMEVED WTEPELPDEA VLEAAASVPE PKQPEPQTPP PPPSTTTSTV ASRSLAEMMN REEAEVEEKQ KIQIPRSLGS FKEETNKISD
301: LSETELNALQ ELRHLLQVSQ DSSKTSIWGV PLLKDDRTDV VLLKFLRARD FKPQEAYSML NKTLQWRIDF NIEELLDENL GDDLDKVVFM QGQDKENHPV
401: CYNVYGEFQN KDLYQKTFSD EEKRERFLRW RIQFLEKSIR NLDFVAGGVS TICQVNDLKN SPGPGKTELR LATKQALHLL QDNYPEFVSK QIFINVPWWY
501: LAFYRIISPF MSQRSKSKLV FAGPSRSAET LLKYISPEHV PVQYGGLSVD NCECNSDFTH DDIATEITVK PTTKQTVEII VYEKCTIVWE IRVVGWEVSY
601: GAEFVPENKE GYTVIIQKPR KMTAKNELVV SHSFKVGEVG RILLTVDNPT STKKMLIYRF KVKPLACE

Arabidopsis Description

PATL5Patellin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.