Factsheet for AT1G72150.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58916	Canola	cytosol	20.24	84.06
Bra016084.1-P	Field mustard	cytosol	81.85	84.05
CDX96377	Canola	cytosol	81.33	83.81
CDX68279	Canola	cytosol	76.44	82.49
Bra008012.1-P	Field mustard	cytosol	80.8	82.38
CDY03655	Canola	cytosol	80.98	82.12
CDY71842	Canola	cytosol	68.59	81.7
CDX82182	Canola	cytosol	80.63	80.35
CDY71835	Canola	cytosol	39.97	80.07
Bra003892.1-P	Field mustard	cytosol	72.77	79.89
AT1G22530.1	Thale cress	cytosol	70.33	59.0
GSMUA_Achr2P08100_001	Banana	cytosol	38.05	54.91
KRG99105	Soybean	cytosol	13.44	52.03
Zm00001d041705_P001	Maize	cytosol, mitochondrion	9.42	50.47
HORVU3Hr1G082150.1	Barley	cytosol	30.19	50.29
GSMUA_Achr7P23220_001	Banana	cytosol	42.93	49.2
GSMUA_Achr9P08580_001	Banana	cytosol, plasma membrane	38.39	48.25
Zm00001d005304_P001	Maize	mitochondrion	22.16	46.69
Zm00001d005249_P001	Maize	mitochondrion	22.51	46.57
Solyc06g064940.2.1	Tomato	nucleus	46.95	46.38
Solyc11g051160.1.1	Tomato	extracellular, plastid	47.29	46.01
PGSC0003DMT400013297	Potato	cytosol	45.9	45.58
VIT_18s0041g00430.t01	Wine grape	cytosol	48.17	45.54
GSMUA_Achr6P18780_001	Banana	cytosol	45.55	45.0
KRH44929	Soybean	endoplasmic reticulum	44.15	43.92
KRH23751	Soybean	endoplasmic reticulum	46.42	43.89
Zm00001d043169_P001	Maize	cytosol	16.06	43.6
AT1G72160.1	Thale cress	nucleus	37.17	43.47
Zm00001d012254_P003	Maize	mitochondrion	42.06	43.35
GSMUA_Achr3P22170_001	Banana	cytosol	39.62	43.16
GSMUA_Achr5P25970_001	Banana	cytosol	41.36	42.7
GSMUA_Achr6P07270_001	Banana	cytosol, nucleus, plastid	38.39	42.31
Zm00001d042664_P001	Maize	plasma membrane	41.88	42.03
EES10230	Sorghum	cytosol	37.35	41.8
KXG33790	Sorghum	cytosol	42.23	41.02
TraesCS3B01G417500.1	Wheat	golgi	41.01	40.66
TraesCS3A01G385300.1	Wheat	cytosol	40.84	40.48
Os01t0874700-01	Rice	plasma membrane	42.93	40.13
Os05t0429400-01	Rice	plasma membrane	40.66	39.83
TraesCS3D01G378300.1	Wheat	cytosol	40.66	39.69
OQU78068	Sorghum	cytosol	35.43	38.59
TraesCS1B01G279200.1	Wheat	cytosol	41.01	38.52
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	41.71	38.24
TraesCS1D01G268600.1	Wheat	golgi	40.66	38.2
TraesCS1A01G268500.1	Wheat	cytosol	40.31	37.87
Zm00001d038262_P001	Maize	plasma membrane	40.66	37.58
AT3G51670.1	Thale cress	cytosol	26.7	37.41
Zm00001d010205_P002	Maize	cytosol	34.21	36.36
HORVU3Hr1G082110.2	Barley	plastid	40.49	35.97
HORVU1Hr1G075150.4	Barley	plasma membrane	40.14	34.64
AT1G30690.2	Thale cress	cytosol	32.29	34.26
AT4G09160.1	Thale cress	cytosol	33.51	28.74

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	EntrezGene:843546	ProteinID:AAG51793.1	ProteinID:AEE35282.1	EMBL:AK222034
ArrayExpress:AT1G72150	EnsemblPlantsGene:AT1G72150	RefSeq:AT1G72150	TAIR:AT1G72150	RefSeq:AT1G72150-TAIR-G	EnsemblPlants:AT1G72150.1
TAIR:AT1G72150.1	EMBL:AY045913	EMBL:AY113865	Unigene:At.43384	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0000003	GO:GO:0002020	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005794	GO:GO:0005886	GO:GO:0007049	GO:GO:0008150
GO:GO:0008289	GO:GO:0009506	GO:GO:0009507	GO:GO:0009536	GO:GO:0009653	GO:GO:0009856
GO:GO:0009860	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0030154
GO:GO:0040007	GO:GO:0048046	GO:GO:0051301	InterPro:GOLD_dom	InterPro:GOLD_dom_sf	InterPro:IPR001251
InterPro:IPR009038	InterPro:IPR036865	RefSeq:NP_177360.1	Symbol:PATL1	PFAM:PF00650	PFAM:PF03765
PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001017
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007131
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PFscan:PS50191	PFscan:PS50866
PANTHER:PTHR23324	PANTHER:PTHR23324:SF96	UniProt:Q56WK6	SMART:SM00516	SMART:SM01100	SUPFAM:SSF101576
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000009EE3B	SEG:seg	:	:

Description

PATL1Patellin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q56WK6]

Coordinates

chr1:+:27148261..27150994

Molecular Weight (calculated)

64049.4 Da

IEP (calculated)

4.499

GRAVY (calculated)

-0.535

Length

573 amino acids

Sequence
(BLAST)

001: MAQEEVQKSA DVAAAPVVKE KPITDKEVTI PTPVAEKEEV AAPVSDEKAV PEKEVTPEKE APAAEAEKSV SVKEEETVVV AEKVVVLTAE EVQKKALEEF
101: KELVREALNK REFTAPVTPV KEEKTEEKKT EEETKEEEKT EEKKEETTTE VKVEEEKPAV PAAEEEKSSE AAPVETKSEE KPEEKAEVTT EKASSAEEDG
201: TKTVEAIEES IVSVSPPESA VAPVVVETVA VAEAEPVEPE EVSIWGVPLL QDERSDVILT KFLRARDFKV KEALTMLKNT VQWRKENKID ELVESGEEVS
301: EFEKMVFAHG VDKEGHVVIY SSYGEFQNKE LFSDKEKLNK FLSWRIQLQE KCVRAIDFSN PEAKSSFVFV SDFRNAPGLG KRALWQFIRR AVKQFEDNYP
401: EFAAKELFIN VPWWYIPYYK TFGSIITSPR TRSKMVLAGP SKSADTIFKY IAPEQVPVKY GGLSKDTPLT EETITEAIVK PAANYTIELP ASEACTLSWE
501: LRVLGADVSY GAQFEPTTEG SYAVIVSKTR KIGSTDEPVI TDSFKVGEPG KIVITIDNQT SKKKKVLYRF KTQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.