Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G72160.1 | KXG22896 | AT3G54220.1 | 19228333 |
| AT1G72160.1 | OQU82754 | AT3G54220.1 | 19228333 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012254_P003 | Maize | mitochondrion | 86.78 | 92.09 |
| HORVU3Hr1G082150.1 | Barley | cytosol | 52.2 | 89.53 |
| EES10230 | Sorghum | cytosol | 75.25 | 86.72 |
| Os01t0874700-01 | Rice | plasma membrane | 83.05 | 79.93 |
| TraesCS3B01G417500.1 | Wheat | golgi | 78.14 | 79.76 |
| TraesCS3A01G385300.1 | Wheat | cytosol | 77.63 | 79.24 |
| TraesCS3D01G378300.1 | Wheat | cytosol | 78.14 | 78.53 |
| HORVU3Hr1G082110.2 | Barley | plastid | 77.8 | 71.16 |
| OQU78068 | Sorghum | cytosol | 61.53 | 69.01 |
| GSMUA_Achr7P23220_001 | Banana | cytosol | 55.25 | 65.2 |
| VIT_09s0002g09040.t01 | Wine grape | cytosol | 12.37 | 64.04 |
| GSMUA_Achr6P18780_001 | Banana | cytosol | 60.68 | 61.72 |
| KRG99105 | Soybean | cytosol | 15.42 | 61.49 |
| Bra000675.1-P | Field mustard | cytosol | 31.36 | 59.68 |
| GSMUA_Achr3P22170_001 | Banana | cytosol | 52.71 | 59.13 |
| GSMUA_Achr5P25970_001 | Banana | cytosol | 55.42 | 58.92 |
| CDX90715 | Canola | cytosol | 30.68 | 58.39 |
| KRH23753 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 40.0 | 55.66 |
| VIT_07s0031g03220.t01 | Wine grape | cytosol | 47.29 | 53.45 |
| CDY58916 | Canola | cytosol | 12.37 | 52.9 |
| KRH63933 | Soybean | plasma membrane | 49.32 | 52.24 |
| KRH54012 | Soybean | nucleus | 49.32 | 52.24 |
| VIT_18s0041g00430.t01 | Wine grape | cytosol | 52.71 | 51.32 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, plastid | 53.39 | 50.4 |
| KRH59683 | Soybean | cytosol | 45.93 | 50.28 |
| Solyc11g027880.1.1 | Tomato | cytosol, endoplasmic reticulum, plastid | 41.69 | 50.2 |
| PGSC0003DMT400065886 | Potato | cytosol | 41.69 | 50.1 |
| Solyc06g064940.2.1 | Tomato | nucleus | 48.14 | 48.97 |
| KRH41016 | Soybean | endoplasmic reticulum | 47.63 | 48.87 |
| PGSC0003DMT400013297 | Potato | cytosol | 47.29 | 48.35 |
| CDY03654 | Canola | nucleus | 39.83 | 48.06 |
| CDX82180 | Canola | nucleus | 39.83 | 48.06 |
| CDY50441 | Canola | plasma membrane | 39.49 | 48.04 |
| KRH23751 | Soybean | endoplasmic reticulum | 49.32 | 48.02 |
| Bra008013.1-P | Field mustard | nucleus | 40.34 | 47.98 |
| KRH44929 | Soybean | endoplasmic reticulum | 46.61 | 47.74 |
| Solyc11g051160.1.1 | Tomato | extracellular, plastid | 47.46 | 47.54 |
| VIT_05s0029g01570.t01 | Wine grape | cytosol | 32.37 | 47.51 |
| Bra003891.1-P | Field mustard | cytosol | 40.51 | 47.42 |
| AT1G72160.1 | Thale cress | nucleus | 39.15 | 47.14 |
| VIT_18s0041g00420.t01 | Wine grape | cytosol | 45.76 | 46.39 |
| CDX68278 | Canola | cytosol | 34.41 | 46.24 |
| Bra016084.1-P | Field mustard | cytosol | 41.86 | 44.27 |
| CDX68279 | Canola | cytosol | 39.83 | 44.26 |
| CDX96377 | Canola | cytosol | 41.69 | 44.24 |
| Bra008012.1-P | Field mustard | cytosol | 41.53 | 43.59 |
| CDY03655 | Canola | cytosol | 41.36 | 43.19 |
| EES18028 | Sorghum | plastid | 31.36 | 42.92 |
| Bra003892.1-P | Field mustard | cytosol | 37.8 | 42.72 |
| AT1G72150.1 | Thale cress | cytosol | 41.02 | 42.23 |
| CDY71835 | Canola | cytosol | 20.34 | 41.96 |
| CDX82182 | Canola | cytosol | 40.68 | 41.74 |
| CDY71842 | Canola | cytosol | 33.39 | 40.96 |
| EER88801 | Sorghum | cytosol | 35.25 | 39.85 |
| AT1G22530.1 | Thale cress | cytosol | 41.86 | 36.16 |
| Bra040854.1-P | Field mustard | cytosol | 42.88 | 35.84 |
| CDY21368 | Canola | cytosol | 39.32 | 35.58 |
| CDY66581 | Canola | cytosol | 37.46 | 35.3 |
| AT4G09160.1 | Thale cress | cytosol | 38.14 | 33.68 |
| CDY05051 | Canola | nucleus | 38.14 | 32.42 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.1 | UniProt:A0A1B6Q7A0 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:GOLD_dom | InterPro:GOLD_dom_sf | InterPro:IPR001251 | InterPro:IPR009038 | InterPro:IPR036865 | EnsemblPlants:KXG33790 |
| ProteinID:KXG33790 | ProteinID:KXG33790.1 | PFAM:PF00650 | PFAM:PF03765 | PFscan:PS50191 | PFscan:PS50866 |
| PANTHER:PTHR23324 | PANTHER:PTHR23324:SF143 | SMART:SM00516 | SMART:SM01100 | EnsemblPlantsGene:SORBI_3003G373100 | SUPFAM:SSF101576 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0003C72D4B | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr3:+:68853929..68856936
Molecular Weight (calculated)
64336.7 Da
IEP (calculated)
4.305
GRAVY (calculated)
-0.422
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEETQPEAA AAAAAAAPPA AEVVVTEAVA AEVEVPAAAE AEAEPETEKK ADEAAVTADD AGEGTGSFKE ESNLVEDLPD PEKKALDEFK QLIAAALAAG
101: EFNLPPPPPP PKAKEEPKAE ETKTEEAKTE ETKTEEAKTE EPVKEEPKAE AEAAAEEPKA EVAADAPAEE VKTEVPPPEE AKAETVAEEA KPAEPEPQEK
201: TVVVAEEETA TKTVETIEET VVSAPAATSE EAVAPEAAAE SDAAAPEPVL IWGVPLVGDD ECTDTVLLKF LRAREFKVKE AMAMLKSAVL WRKRFGITSL
301: LDADLGLPEL ENVVFYRGAD REGHPVCYNV YGEFQDKDLY EKAFGDDEKR ERFLKWRIQL LERGILSKLD FSPSGICSMV QVTDLKNSPP MLGKHRAVTR
401: QAVTLLQDNY PEFIAKKVFI NVPWWYLAAN KMMSPFLTQR TKSKFVFASP AKSAETLFRY IAPEQVPVQF GGLFKVDDPE FTTSDIVTEL TIKPSSKETI
501: EIPVTENSTI VWELRVLGWE VSYGAEFTPD AEGGYTVIVQ KSRKVPANEE PIMKGSFKVG EPGKLVLTVN NPASKKKKLL YRSKVKSTSE
101: EFNLPPPPPP PKAKEEPKAE ETKTEEAKTE ETKTEEAKTE EPVKEEPKAE AEAAAEEPKA EVAADAPAEE VKTEVPPPEE AKAETVAEEA KPAEPEPQEK
201: TVVVAEEETA TKTVETIEET VVSAPAATSE EAVAPEAAAE SDAAAPEPVL IWGVPLVGDD ECTDTVLLKF LRAREFKVKE AMAMLKSAVL WRKRFGITSL
301: LDADLGLPEL ENVVFYRGAD REGHPVCYNV YGEFQDKDLY EKAFGDDEKR ERFLKWRIQL LERGILSKLD FSPSGICSMV QVTDLKNSPP MLGKHRAVTR
401: QAVTLLQDNY PEFIAKKVFI NVPWWYLAAN KMMSPFLTQR TKSKFVFASP AKSAETLFRY IAPEQVPVQF GGLFKVDDPE FTTSDIVTEL TIKPSSKETI
501: EIPVTENSTI VWELRVLGWE VSYGAEFTPD AEGGYTVIVQ KSRKVPANEE PIMKGSFKVG EPGKLVLTVN NPASKKKKLL YRSKVKSTSE
001: MSQDSATTTP PPPLTSDVSM PSGEEDEPKH VTSEEEAPVT SETNLKLPLM PELEESNHTA EVVSEKVTPE TMTLESEGLN HAAEDSEQTH EVTPETETAK
101: LEVLNHTAED SEQTHEVTPE KETVKSEFLN HVAEDSEQTH EVTPETETVK SEVLNHAAED SEQPRGVTPT PETETSEADT SLLVTSETEE PNHAAEDYSE
201: TEPSQKLMLE QRRKYMEVED WTEPELPDEA VLEAAASVPE PKQPEPQTPP PPPSTTTSTV ASRSLAEMMN REEAEVEEKQ KIQIPRSLGS FKEETNKISD
301: LSETELNALQ ELRHLLQVSQ DSSKTSIWGV PLLKDDRTDV VLLKFLRARD FKPQEAYSML NKTLQWRIDF NIEELLDENL GDDLDKVVFM QGQDKENHPV
401: CYNVYGEFQN KDLYQKTFSD EEKRERFLRW RIQFLEKSIR NLDFVAGGVS TICQVNDLKN SPGPGKTELR LATKQALHLL QDNYPEFVSK QIFINVPWWY
501: LAFYRIISPF MSQRSKSKLV FAGPSRSAET LLKYISPEHV PVQYGGLSVD NCECNSDFTH DDIATEITVK PTTKQTVEII VYEKCTIVWE IRVVGWEVSY
601: GAEFVPENKE GYTVIIQKPR KMTAKNELVV SHSFKVGEVG RILLTVDNPT STKKMLIYRF KVKPLACE
101: LEVLNHTAED SEQTHEVTPE KETVKSEFLN HVAEDSEQTH EVTPETETVK SEVLNHAAED SEQPRGVTPT PETETSEADT SLLVTSETEE PNHAAEDYSE
201: TEPSQKLMLE QRRKYMEVED WTEPELPDEA VLEAAASVPE PKQPEPQTPP PPPSTTTSTV ASRSLAEMMN REEAEVEEKQ KIQIPRSLGS FKEETNKISD
301: LSETELNALQ ELRHLLQVSQ DSSKTSIWGV PLLKDDRTDV VLLKFLRARD FKPQEAYSML NKTLQWRIDF NIEELLDENL GDDLDKVVFM QGQDKENHPV
401: CYNVYGEFQN KDLYQKTFSD EEKRERFLRW RIQFLEKSIR NLDFVAGGVS TICQVNDLKN SPGPGKTELR LATKQALHLL QDNYPEFVSK QIFINVPWWY
501: LAFYRIISPF MSQRSKSKLV FAGPSRSAET LLKYISPEHV PVQYGGLSVD NCECNSDFTH DDIATEITVK PTTKQTVEII VYEKCTIVWE IRVVGWEVSY
601: GAEFVPENKE GYTVIIQKPR KMTAKNELVV SHSFKVGEVG RILLTVDNPT STKKMLIYRF KVKPLACE
Arabidopsis Description
PATL5Patellin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.