Factsheet for Zm00001d052665_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0137g00470.t01	Wine grape	cytosol	41.09	54.25
Os05t0345100-00	Rice	plastid	76.73	49.68
Zm00001d038005_P001	Maize	mitochondrion, plastid	96.04	45.33
TraesCS1A01G198900.1	Wheat	plastid	90.59	43.26
TraesCS1D01G202700.1	Wheat	plastid	89.6	42.79
TraesCS1B01G213900.1	Wheat	plastid	89.6	42.79
GSMUA_Achr5P07450_001	Banana	plastid	83.17	42.42
CDX73635	Canola	cytosol, plastid	56.44	41.16
CDX78958	Canola	cytosol, plastid	56.44	41.16
CDY13832	Canola	cytosol, plastid	56.44	41.16
CDY29572	Canola	cytosol, plastid	56.44	41.16
GSMUA_Achr9P17890_001	Banana	cytosol	79.7	40.86
GSMUA_Achr2P18920_001	Banana	plastid	81.19	38.86
PGSC0003DMT400030364	Potato	plastid	79.21	37.56
Solyc09g015080.2.1	Tomato	cytosol, plastid	78.71	37.5
GSMUA_Achr3P09950_001	Banana	plastid	77.72	37.03
Zm00001d010049_P001	Maize	plastid	91.58	36.85
KRH76050	Soybean	cytosol	76.73	36.82
KRH00348	Soybean	cytosol	79.21	36.78
KRH65546	Soybean	cytosol	76.24	36.58
CDX78026	Canola	cytosol, plastid	74.26	36.41
Bra036782.1-P	Field mustard	cytosol, plastid	74.26	36.41
AT3G51670.1	Thale cress	cytosol	73.27	36.19
Zm00001d043169_P001	Maize	cytosol	37.62	36.02
CDX73705	Canola	cytosol, plastid	73.27	35.92
VIT_08s0058g00640.t01	Wine grape	cytosol, mitochondrion, nucleus	79.7	35.86
CDX90637	Canola	cytosol	62.87	31.59
Bra012843.1-P	Field mustard	cytosol	68.81	31.45
Zm00001d041705_P001	Maize	cytosol, mitochondrion	15.35	28.97
Zm00001d005249_P001	Maize	mitochondrion	38.61	28.16
Zm00001d005304_P001	Maize	mitochondrion	37.62	27.94
CDY29036	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	61.88	20.97
Zm00001d046995_P001	Maize	plasma membrane	48.51	18.53
Zm00001d012254_P003	Maize	mitochondrion	49.01	17.81
HORVU1Hr1G051510.3	Barley	plastid	41.09	17.73
Zm00001d042664_P001	Maize	plasma membrane	49.51	17.51
Zm00001d038262_P001	Maize	plasma membrane	50.0	16.29
Zm00001d010205_P002	Maize	cytosol	35.64	13.36
Os05t0345175-01	Rice	cytosol	0.99	2.53

Protein Annotations

EnsemblPlants:Zm00001d052665_P001	EnsemblPlants:Zm00001d052665_T001	EnsemblPlantsGene:Zm00001d052665	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR23324	PANTHER:PTHR23324:SF57	PFAM:PF00650	PFscan:PS50191
ProteinID:AQK57621.1	SMART:SM00516	SUPFAM:SSF52087	UniParc:UPI000843DCF5	UniProt:A0A1D6QID5	MapMan:35.1

Description

Putative patellin family protein

Coordinates

chr4:+:196404558..196405441

Molecular Weight (calculated)

23088.8 Da

IEP (calculated)

4.974

GRAVY (calculated)

-0.147

Length

202 amino acids

Sequence
(BLAST)

001: MLLCCAAWLA EFGADAVVDE DLGFKELEGV VAYMHGWDRD GHPVCYNAYD VFKDRGMYER AFDDGERLAR FLRWRVQVTD LRDMPKRELR AASNQILSLF
101: QDNYPEMVAR KVFINVPWYF SVLFSMVSPF LTERTKSKFV IAREGNVAET LYKFIRPELV PVQYGGLSRA GELENGPPKP ASEFTIKGGV KVFLEIDGIE
201: VP

Best Arabidopsis Sequence Match ( AT1G72160.1 )
(BLAST)

001: MAEEPTTTTL VTPEKLPSPS LTPSEVSEST QDALPTETET LEKVTETNPP ETADTTTKPE EETAAEHHPP TVTETETAST EKQEVKDEAS QKEVAEEKKS
101: MIPQNLGSFK EESSKLSDLS NSEKKSLDEL KHLVREALDN HQFTNTPEEV KIWGIPLLED DRSDVVLLKF LRAREFKVKD SFAMLKNTIK WRKEFKIDEL
201: VEEDLVDDLD KVVFMHGHDR EGHPVCYNVY GEFQNKELYN KTFSDEEKRK HFLRTRIQFL ERSIRKLDFS SGGVSTIFQV NDMKNSPGLG KKELRSATKQ
301: AVELLQDNYP EFVFKQAFIN VPWWYLVFYT VIGPFMTPRS KSKLVFAGPS RSAETLFKYI SPEQVPVQYG GLSVDPCDCN PDFSLEDSAS EITVKPGTKQ
401: TVEIIIYEKC ELVWEIRVTG WEVSYKAEFV PEEKDAYTVV IQKPRKMRPS DEPVLTHSFK VNELGKVLLT VDNPTSKKKK LVYRFNVKPL

Arabidopsis Description

PATL3Patellin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q56Z59]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.