Factsheet for Os05t0345175-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G202700.1	Wheat	plastid	94.94	17.73
TraesCS1B01G213900.1	Wheat	plastid	93.67	17.49
TraesCS1A01G198900.1	Wheat	plastid	92.41	17.26
EES18028	Sorghum	plastid	92.41	16.94
HORVU1Hr1G051510.3	Barley	plastid	93.67	15.81
Zm00001d038005_P001	Maize	mitochondrion, plastid	84.81	15.65
GSMUA_Achr5P07450_001	Banana	plastid	73.42	14.65
Zm00001d010049_P001	Maize	plastid	91.14	14.34
GSMUA_Achr9P17890_001	Banana	cytosol	70.89	14.21
GSMUA_Achr3P09950_001	Banana	plastid	67.09	12.5
GSMUA_Achr2P18920_001	Banana	plastid	65.82	12.32
KRH00348	Soybean	cytosol	67.09	12.18
KRH65546	Soybean	cytosol	64.56	12.11
Solyc09g015080.2.1	Tomato	cytosol, plastid	64.56	12.03
PGSC0003DMT400030364	Potato	plastid	64.56	11.97
CDX78026	Canola	cytosol, plastid	62.03	11.89
CDX73705	Canola	cytosol, plastid	62.03	11.89
Bra036782.1-P	Field mustard	cytosol, plastid	62.03	11.89
KRH76050	Soybean	cytosol	63.29	11.88
AT3G51670.1	Thale cress	cytosol	60.76	11.74
CDX90637	Canola	cytosol	58.23	11.44
VIT_08s0058g00640.t01	Wine grape	cytosol, mitochondrion, nucleus	60.76	10.69
Bra012843.1-P	Field mustard	cytosol	58.23	10.41
CDY29036	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	59.49	7.89
Os05t0429400-01	Rice	plasma membrane	46.84	6.32
Os01t0874700-01	Rice	plasma membrane	46.84	6.04
Zm00001d052665_P001	Maize	cytosol	2.53	0.99
Os05t0345100-00	Rice	plastid	3.8	0.96
Os06t0671800-01	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	1.27	0.28
CDY29572	Canola	cytosol, plastid	0.0	0.0
VIT_01s0137g00470.t01	Wine grape	cytosol	0.0	0.0
CDY13832	Canola	cytosol, plastid	0.0	0.0
CDX78958	Canola	cytosol, plastid	0.0	0.0
CDX73635	Canola	cytosol, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Os05t0345175-01	EnsemblPlantsGene:Os05g0345175	PANTHER:PTHR23324	PANTHER:PTHR23324:SF57	ProteinID:BAS93489.1	UniParc:UPI000393B506
UniProt:A0A0N7KKK7	MapMan:35.1	:	:	:	:

Description

Similar to patellin-5. (Os05t0345175-01)

Coordinates

chr5:+:16219688..16220126

Molecular Weight (calculated)

8736.3 Da

IEP (calculated)

8.445

GRAVY (calculated)

-0.411

Length

79 amino acids

Sequence
(BLAST)

1: DLVVGGWELE YGAEYVPAAE DSYTLCVERT RKVPAAADEP VHNAFTAREA GKMVLSIDNS GSRKRKVAAY RYFVRKPSA

Best Arabidopsis Sequence Match ( AT3G51670.1 )
(BLAST)

001: MDASLSPFDH QKTQNTEPKK SFITSLITLR SNNIKEDTYF VSELKPTEQK SLQELKEKLS ASSSKASSMW GVSLLGGDDK ADVILLKFLR ARDFKVADSL
101: RMLEKCLEWR EEFKAEKLTE EDLGFKDLEG KVAYMRGYDK EGHPVCYNAY GVFKEKEMYE RVFGDEEKLN KFLRWRVQVL ERGVKMLHFK PGGVNSIIQV
201: TDLKDMPKRE LRVASNQILS LFQDNYPELV ATKIFINVPW YFSVIYSMFS PFLTQRTKSK FVMSKEGNAA ETLYKFIRPE DIPVQYGGLS RPTDSQNGPP
301: KPASEFSIKG GEKVNIQIEG IEGGATITWD IVVGGWDLEY SAEFVPNAEE SYAIVVEKPK KMKATDEAVC NSFTTVEAGK LILSVDNTLS RKKKVAAYRY
401: TVRKSTTTV

Arabidopsis Description

PATL6Patellin-6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.