Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400026646 | Potato | cytosol | 96.22 | 97.3 |
| VIT_07s0005g03430.t01 | Wine grape | cytosol | 43.11 | 43.21 |
| KRH32187 | Soybean | cytosol | 40.89 | 38.98 |
| GSMUA_Achr1P05640_001 | Banana | cytosol | 35.33 | 38.31 |
| KRH19560 | Soybean | cytosol | 39.78 | 38.09 |
| Solyc02g070210.2.1 | Tomato | cytosol | 39.11 | 37.37 |
| Solyc09g015080.2.1 | Tomato | cytosol, plastid | 31.33 | 33.25 |
| Solyc11g027880.1.1 | Tomato | cytosol, endoplasmic reticulum, plastid | 34.89 | 32.04 |
| Solyc06g064940.2.1 | Tomato | nucleus | 33.11 | 25.69 |
| Solyc11g051160.1.1 | Tomato | extracellular, plastid | 31.56 | 24.11 |
Protein Annotations
| EnsemblPlants:Solyc09g025230.2.1 | EnsemblPlantsGene:Solyc09g025230.2 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom_sf |
| InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF82 | PFAM:PF00650 | PFscan:PS50191 |
| SEG:seg | SMART:SM00516 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI000276C4FC | UniProt:K4CSI4 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr9:-:72407455..72409462
Molecular Weight (calculated)
52602.2 Da
IEP (calculated)
6.458
GRAVY (calculated)
-0.478
Length
450 amino acids
Sequence
(BLAST)
(BLAST)
001: MREEVVVPVA EEEVAVDDIM SSSDTDTESS DEHLDHDDND DHQPTFDQPG QLVSPLDIKA SRKHALLRLR CRVEDAILGG YIYGKNKNQS LSVKTITEDL
101: TGISLWGVPL LPSEDNTRTD IVLLNFLRAK DYGVYDAYKM MRKTLRWRRE FRVTEILDEK LFSPDLEKLW YNDDGKDREG RLLCYNVFRN IKNKELEEEI
201: WGRHNHHHEC LRWRIHILEK AIQQLEFKQG GVNSVVMITD LGNSPGNAWK EVRWINRKMM SLVHDHYPGI IYKNIFINVP VWFSTVHALN LRMITQRSKN
301: AFIFVKPSKV TETLLKYISP ENLLAEYGGL KKDKDVEFST DDKVLEISIK PCSFCLIKMP VKEVEVTITW DLIVVGNEVS YREEFIPDDD CSYRVMLQED
401: KKMVESVRNS FHIREEGRIV ITIDNPTYKK KTAFYRYKTK PSVPLYMCLK
101: TGISLWGVPL LPSEDNTRTD IVLLNFLRAK DYGVYDAYKM MRKTLRWRRE FRVTEILDEK LFSPDLEKLW YNDDGKDREG RLLCYNVFRN IKNKELEEEI
201: WGRHNHHHEC LRWRIHILEK AIQQLEFKQG GVNSVVMITD LGNSPGNAWK EVRWINRKMM SLVHDHYPGI IYKNIFINVP VWFSTVHALN LRMITQRSKN
301: AFIFVKPSKV TETLLKYISP ENLLAEYGGL KKDKDVEFST DDKVLEISIK PCSFCLIKMP VKEVEVTITW DLIVVGNEVS YREEFIPDDD CSYRVMLQED
401: KKMVESVRNS FHIREEGRIV ITIDNPTYKK KTAFYRYKTK PSVPLYMCLK
001: MTAEVKVEEK QVESEVVIAP AVVPEETTVK AVVEETKVEE DESKPEGVEK SASFKEESDF FADLKESEKK ALSDLKSKLE EAIVDNTLLK TKKKESSPMK
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS
Arabidopsis Description
PATL4Patellin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q94C59]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.