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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:peroxisome, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:plasma membrane
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc08g081450.2.1 Tomato plastid 60.76 74.13
KRH77576 Soybean plastid 30.38 33.68
CDX67496 Canola plastid 28.48 32.26
Bra028497.1-P Field mustard plastid 27.85 31.54
CDY35038 Canola plastid 27.53 31.18
AT5G41470.1 Thale cress plastid 26.58 30.32
TraesCS5D01G562900.1 Wheat plastid 21.2 25.87
TraesCS5D01G562700.1 Wheat plastid 22.78 24.24
TraesCS7B01G001100.1 Wheat plastid 22.47 23.83
Zm00001d034934_P001 Maize plastid 20.25 23.7
TraesCS5B01G571800.1 Wheat plastid 20.89 23.32
TraesCS7B01G001000.1 Wheat plastid 21.2 23.26
TraesCS5B01G571700.1 Wheat plastid 22.78 23.23
TraesCS5D01G562800.1 Wheat plastid 20.89 22.92
TraesCS5B01G571900.1 Wheat plastid 20.57 22.41
KXG37063 Sorghum plastid 14.56 19.74
TraesCS6B01G336600.1 Wheat plastid 9.81 11.92
Protein Annotations
EnsemblPlants:PGSC0003DMT400032107EnsemblPlantsGene:PGSC0003DMG400012326Gene3D:3.10.450.50GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:NTF2-like_dom_sfPANTHER:PTHR33698PANTHER:PTHR33698:SF1PGSC:PGSC0003DMG400012326SUPFAM:SSF54427TMHMM:TMhelix
UniParc:UPI00029522C9UniProt:M1AWV9MapMan:35.2:::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400012326]
Coordinates
chr8:+:55155207..55161500
Molecular Weight (calculated)
36312.4 Da
IEP (calculated)
8.872
GRAVY (calculated)
0.055
Length
316 amino acids
Sequence
(BLAST)
001: MALSSQFLQH NVWSNSEFRR TLSVPPLLKA NHEPVKKLSQ RKLKIRGIKN KSNSLVTFSM LNPESGTSMS AVSPSDTIKK FYSSINNKDM NQLALLLAEN
101: CFYDDFSYSQ PFQRREEALK FLEQLATCMG KNTEYCIEHI YEGVDLTIVV NWHLEWNKKQ VPFTRGCSCY ELSRDGEELV IRKAQVILES PIKPGSFALV
201: RISVPRRSLF FPDIGKSTTA ILDSCSVSIQ LMHAVFLSWK MQEVFQKVIS VCDAFPEAAE WLFLMSHLLL PSIYNIALQP SILPILACYR KLWSIIVAFL
301: TLIYTIFMFI IKKFHE
Best Arabidopsis Sequence Match ( AT5G41470.1 )
(BLAST)
001: MASMVNVTSI IVTRNLITKF KTPRLKLDLP SLQHSSQLNA IKNDPIKMIN KYASRRNIVV SCLDRPNSRP NQISGYDAVM KFYSSINEKN QDQLSSCISS
101: DCFIDDFSFP KPFRGKQEAM EFFEELVKSM GQNVKFCVEN VCEGDGHSAA VNWHLEWKGR KIPFTRGCSF YEFIDEGGRL VIRNARILIE SPIKPGGITL
201: SLLKNITFLF DEFPKGAELF LEKPYAIIQA AIRIYGLFLA PLINHVMASY LKLLSNMAEF FLLVVKIIIK IRNLFFK
Arabidopsis Description
Nuclear transport factor 2 (NTF2) family protein [Source:UniProtKB/TrEMBL;Acc:F4JYE8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.