Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G562800.1 | Wheat | plastid | 97.22 | 97.22 |
| TraesCS5B01G571800.1 | Wheat | plastid | 71.88 | 73.14 |
| TraesCS7B01G001100.1 | Wheat | plastid | 55.56 | 53.69 |
| TraesCS5B01G571700.1 | Wheat | plastid | 56.6 | 52.58 |
| Zm00001d034934_P001 | Maize | plastid | 46.18 | 49.26 |
| TraesCS5B01G571900.1 | Wheat | plastid | 46.18 | 45.86 |
| KXG37063 | Sorghum | plastid | 30.9 | 38.2 |
| AT5G41470.1 | Thale cress | plastid | 25.69 | 26.71 |
| CDY35038 | Canola | plastid | 23.61 | 24.37 |
| Bra028497.1-P | Field mustard | plastid | 23.26 | 24.01 |
| CDX67496 | Canola | plastid | 22.92 | 23.66 |
| TraesCS6B01G336600.1 | Wheat | plastid | 21.18 | 23.46 |
| Solyc08g081450.2.1 | Tomato | plastid | 20.83 | 23.17 |
| TraesCS2B01G058300.1 | Wheat | mitochondrion | 15.62 | 22.06 |
| KRH77576 | Soybean | plastid | 21.53 | 21.75 |
| Solyc12g056190.1.1 | Tomato | plastid | 20.49 | 21.69 |
| PGSC0003DMT400032107 | Potato | plastid | 23.26 | 21.2 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G001000.1 | EnsemblPlantsGene:TraesCS7B01G001000 | Gene3D:3.10.450.50 | InterPro:NTF2-like_dom_sf | PANTHER:PTHR33698 | PANTHER:PTHR33698:SF1 |
| SUPFAM:SSF54427 | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7B:+:261219..262669
Molecular Weight (calculated)
33099.5 Da
IEP (calculated)
9.938
GRAVY (calculated)
-0.052
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSPLSACKH PNTMNSALTH ISFHSPSYFI LKQRPQSRHQ QISIKWRKRQ QCSAKPIRAI PGPNGTGAYR GGNNLPSSPL TDVIQEFYSS LNDKDITRLE
101: KLISLDCVIE DTAYYKPLDV KNTHTYFTRL IKVMGKNAKF AIDEVCQGVE PTVAVMWHLE WRREMIPFAK GCSFFMCSAN GAALLIRKVH IFDESPLKPG
201: KLALEILNFV INVFDTFPYI AKGFLKNKEA LARFFARFYK FCGPFIVPLV AYYTDVPILA YYTRFWSYVA QGFTMVLNML YNIFKRFL
101: KLISLDCVIE DTAYYKPLDV KNTHTYFTRL IKVMGKNAKF AIDEVCQGVE PTVAVMWHLE WRREMIPFAK GCSFFMCSAN GAALLIRKVH IFDESPLKPG
201: KLALEILNFV INVFDTFPYI AKGFLKNKEA LARFFARFYK FCGPFIVPLV AYYTDVPILA YYTRFWSYVA QGFTMVLNML YNIFKRFL
001: MEKDYRAEET VLKLYSDIKD RNIEGISEVI GDECQFFSNF LSKYRLLQGK KQVMAFFYWL IMKLGKDIKI IVKPTFKDGM TVGVQWQLEC DKSHIQLGKG
101: FSFHICHMYQ GKLLIKNVEM FMEPIFHIEH LRLRTMAFAV SIAEKIVTFL RQAENTRRQA MALLLLVLLL LAAAAFYVTR LRF
101: FSFHICHMYQ GKLLIKNVEM FMEPIFHIEH LRLRTMAFAV SIAEKIVTFL RQAENTRRQA MALLLLVLLL LAAAAFYVTR LRF
Arabidopsis Description
unknown protein; Has 12 Blast hits to 12 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT4G22370]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.