Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400013168 | Potato | cytosol | 48.24 | 45.28 |
| PGSC0003DMT400039959 | Potato | cytosol | 48.74 | 44.29 |
| GSMUA_Achr4P33140_001 | Banana | cytosol | 45.73 | 42.13 |
| GSMUA_Achr1P08310_001 | Banana | cytosol | 43.22 | 41.15 |
| Zm00001d012820_P001 | Maize | plastid | 41.71 | 37.22 |
| Zm00001d034890_P001 | Maize | cytosol | 39.2 | 35.45 |
| EER93070 | Sorghum | cytosol | 39.2 | 34.51 |
| Os03t0855600-02 | Rice | plastid | 38.69 | 34.38 |
| TraesCS4A01G320500.1 | Wheat | plastid | 40.7 | 33.47 |
| TraesCS5D01G564700.1 | Wheat | plastid | 40.7 | 33.47 |
| TraesCS5B01G558300.1 | Wheat | cytosol | 40.2 | 33.06 |
| HORVU5Hr1G124350.2 | Barley | nucleus | 40.2 | 20.3 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400033045 | EnsemblPlantsGene:PGSC0003DMG400012687 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0022843 | GO:GO:0034220 | GO:GO:0034765 | GO:GO:0098655 | InterPro:OEP24 | PANTHER:PTHR35284 |
| PANTHER:PTHR35284:SF3 | PGSC:PGSC0003DMG400012687 | SEG:seg | UniParc:UPI000294CC92 | UniProt:M1AYI9 | MapMan:24.4.4 |
Description
Pore protein of 24 kD (OEP24) [Source:PGSC_GENE;Acc:PGSC0003DMG400012687]
Coordinates
chr2:+:40770918..40772124
Molecular Weight (calculated)
22042.9 Da
IEP (calculated)
8.632
GRAVY (calculated)
-0.382
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MISTTIRGRY EGGVREAVTT VTVHGGAVKL NGNVTEATFV NGSSLEGLSF SLEKPGSFLI DFDVPKQDVR FQFMNNMRVM EKPLNFTYTH WRGDNRTVVD
101: GTLAIDSSNK LSANYGFDSG NCKLGYSYVH KGLTTFEPSY DFAKNSWDVA LSQRVDEDNV VKASYQSSSK VLGLEWCKNP ISSGGFKVPF KLNSQARYS
101: GTLAIDSSNK LSANYGFDSG NCKLGYSYVH KGLTTFEPSY DFAKNSWDVA LSQRVDEDNV VKASYQSSSK VLGLEWCKNP ISSGGFKVPF KLNSQARYS
001: MMKASFKGKF DVDKSGSVAS LTFNAGNAKL RATMTDASFV AGPSFNGLSL AVEKPGFFII DYNVPKKDVR FQFMNTIRIA EKPLNLTYIH MRGDNRTIVD
101: GSFVIDPANK LSANYMVGTK NCKLKYTYVH GGIATFEPCY DVAKNMWDFA ISHKLYGGDN LKATYQTSSK MLGLEWSNNS KSTGSFKVCA SMNLAEELKP
201: PKLTAETTWN LEL
101: GSFVIDPANK LSANYMVGTK NCKLKYTYVH GGIATFEPCY DVAKNMWDFA ISHKLYGGDN LKATYQTSSK MLGLEWSNNS KSTGSFKVCA SMNLAEELKP
201: PKLTAETTWN LEL
Arabidopsis Description
OEP24AOuter envelope pore protein 24A, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q1H5C9]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.