Factsheet for Os03t0855600-02

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
cytosol 2
plasma membrane 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 19621931
plastid: 21433289
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012820_P001	Maize	plastid	76.79	77.13
EER93070	Sorghum	cytosol	76.34	75.66
Zm00001d034890_P001	Maize	cytosol	73.66	75.0
TraesCS4A01G320500.1	Wheat	plastid	75.89	70.25
TraesCS5D01G564700.1	Wheat	plastid	75.45	69.83
TraesCS5B01G558300.1	Wheat	cytosol	74.55	69.01
GSMUA_Achr1P08310_001	Banana	cytosol	60.27	64.59
GSMUA_Achr4P33140_001	Banana	cytosol	56.7	58.8
Bra035335.1-P	Field mustard	cytosol	50.0	52.58
CDY02425	Canola	cytosol	50.0	52.58
Solyc04g080190.2.1	Tomato	endoplasmic reticulum, nucleus	49.55	52.36
CDY61017	Canola	cytosol	49.55	52.11
PGSC0003DMT400013168	Potato	cytosol	49.11	51.89
CDX71532	Canola	cytosol	49.11	51.4
CDY22375	Canola	cytosol	48.21	50.94
Bra033653.1-P	Field mustard	cytosol	48.21	50.94
AT5G42960.1	Thale cress	cytosol	48.21	50.7
KRH15230	Soybean	cytosol	47.32	49.53
Solyc12g089100.1.1	Tomato	cytosol	47.77	49.08
KRH38143	Soybean	endoplasmic reticulum	46.88	49.07
PGSC0003DMT400039959	Potato	cytosol	47.32	48.4
AT1G45170.1	Thale cress	cytosol, plastid	45.98	48.36
VIT_18s0001g12290.t01	Wine grape	cytosol	45.54	47.89
HORVU5Hr1G124350.2	Barley	nucleus	69.2	39.34
PGSC0003DMT400033045	Potato	cytosol	34.38	38.69

Protein Annotations

MapMan:24.4.4	EntrezGene:4334833	ProteinID:AAS01981.1	ProteinID:ABF99978.1	EMBL:AK067858	ProteinID:BAF13857.1
ProteinID:BAS87435.1	ProteinID:EEE60328.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0009507
GO:GO:0009527	GO:GO:0009536	GO:GO:0009707	GO:GO:0015288	GO:GO:0016020	GO:GO:0016021
GO:GO:0022843	GO:GO:0034220	GO:GO:0034426	GO:GO:0034765	GO:GO:0046930	GO:GO:0055085
GO:GO:0098655	InterPro:OEP24	EnsemblPlantsGene:Os03g0855600	EnsemblPlants:Os03t0855600-02	PANTHER:PTHR35284	PANTHER:PTHR35284:SF1
UniProt:Q75IQ4	UniParc:UPI0000237EF2	RefSeq:XP_015631663.1	SEG:seg	:	:

Description

OEP24Similar to DANA2. (Os03t0855600-01);Similar to DANA2. (Os03t0855600-02)

Coordinates

chr3:+:36074953..36079713

Molecular Weight (calculated)

24235.7 Da

IEP (calculated)

9.736

GRAVY (calculated)

-0.247

Length

224 amino acids

Sequence
(BLAST)

001: MKATVKGRYE GDKATAAATL AFTPSAADLR FKASATDAAF ARGPSLEGLI LTLEKPGSFL LDLKPHSKDV RFQFMNSALL LDRRVSLTYT HSTTLSPGPA
101: KLPARTALDG SLTFDPANKL SLSHTLGSSG CRVKYSYAHG QDRLTTIEPC FDTANNAWDF AVTRKFQGGD AIKATYQAST KLLALDWTRD SKIGASFKVA
201: ASFDLSDQSK APKLIAESTW NYEI

Best Arabidopsis Sequence Match ( AT5G42960.1 )
(BLAST)

001: MAMKASIKGK YDTDKTSGIG SLAFNAGDIK LRATMTDATL VAGPTLTGLA LAVEKPGSFI VEYNVPKKDV RFQFMNTVRI AEKPLNLTYI HSRADNRTIV
101: DGSLVIDSAN KLSANHMVGT NNCKIKYTYA HGGLATFEPC YDLAKNTWDF AVSRRFYSGD NVRATYQTSS KLLGMEWSRN NKASGFKVCA SVNLADELKT
201: PKLTAETTWN LEM

Arabidopsis Description

OEP24BOuter envelope pore protein 24B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.