Factsheet for GSMUA_Achr1P08310_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
vacuole 1
extracellular 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P33140_001	Banana	cytosol	76.56	74.07
Os03t0855600-02	Rice	plastid	64.59	60.27
CDX71532	Canola	cytosol	59.33	57.94
AT1G45170.1	Thale cress	cytosol, plastid	58.85	57.75
CDY22375	Canola	cytosol	58.37	57.55
Zm00001d012820_P001	Maize	plastid	61.24	57.4
Bra033653.1-P	Field mustard	cytosol	57.89	57.08
Solyc04g080190.2.1	Tomato	endoplasmic reticulum, nucleus	57.89	57.08
Zm00001d034890_P001	Maize	cytosol	59.81	56.82
Bra035335.1-P	Field mustard	cytosol	57.89	56.81
CDY02425	Canola	cytosol	57.89	56.81
CDY61017	Canola	cytosol	57.42	56.34
PGSC0003DMT400013168	Potato	cytosol	56.94	56.13
EER93070	Sorghum	cytosol	60.29	55.75
KRH15230	Soybean	cytosol	56.46	55.14
AT5G42960.1	Thale cress	cytosol	55.98	54.93
KRH38143	Soybean	endoplasmic reticulum	55.98	54.67
TraesCS4A01G320500.1	Wheat	plastid	62.68	54.13
TraesCS5D01G564700.1	Wheat	plastid	62.2	53.72
TraesCS5B01G558300.1	Wheat	cytosol	61.24	52.89
VIT_18s0001g12290.t01	Wine grape	cytosol	50.72	49.77
Solyc12g089100.1.1	Tomato	cytosol	50.72	48.62
PGSC0003DMT400039959	Potato	cytosol	50.24	47.95
PGSC0003DMT400033045	Potato	cytosol	41.15	43.22
HORVU5Hr1G124350.2	Barley	nucleus	59.33	31.47

Protein Annotations

EnsemblPlants:GSMUA_Achr1P08310_001	EnsemblPlants:GSMUA_Achr1T08310_001	EnsemblPlantsGene:GSMUA_Achr1G08310_001	GO:GO:0003674	GO:GO:0005215	GO:GO:0006810
GO:GO:0008150	GO:GO:0022843	GO:GO:0034220	GO:GO:0034765	GO:GO:0098655	InterPro:OEP24
PANTHER:PTHR35284	PANTHER:PTHR35284:SF1	UniParc:UPI000296C35E	UniProt:M0RY39	MapMan:24.4.4	:

Description

DANA2, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G08310_001]

Coordinates

chr1:-:6393604..6397242

Molecular Weight (calculated)

23323.5 Da

IEP (calculated)

9.194

GRAVY (calculated)

-0.394

Length

209 amino acids

Sequence
(BLAST)

001: MKATVKGRYE VDKSVATATL AVHAGDARLK TSFTDATFAG GPSLEGLVLS VEKPGAFILD YNDVRFQFMN SFKAVDKTVN LTYTHARAAN RTALDGSLVF
101: DPANKVSMNY AFGSGNCKVK YWYAHGELRR LVLEPCYDVS KNAWDFALTR KFEGGDSLKA TYQTTTKNLG LEWNRDSKDS SFKISASFNL AEQQKYPKLM
201: AESTWNYEI

Best Arabidopsis Sequence Match ( AT5G42960.1 )
(BLAST)

001: MAMKASIKGK YDTDKTSGIG SLAFNAGDIK LRATMTDATL VAGPTLTGLA LAVEKPGSFI VEYNVPKKDV RFQFMNTVRI AEKPLNLTYI HSRADNRTIV
101: DGSLVIDSAN KLSANHMVGT NNCKIKYTYA HGGLATFEPC YDLAKNTWDF AVSRRFYSGD NVRATYQTSS KLLGMEWSRN NKASGFKVCA SVNLADELKT
201: PKLTAETTWN LEM

Arabidopsis Description

OEP24BOuter envelope pore protein 24B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.