Factsheet for Zm00001d034890_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012820_P001	Maize	plastid	91.36	90.13
EER93070	Sorghum	cytosol	88.64	86.28
Os03t0855600-02	Rice	plastid	75.0	73.66
TraesCS4A01G320500.1	Wheat	plastid	79.09	71.9
TraesCS5D01G564700.1	Wheat	plastid	78.64	71.49
TraesCS5B01G558300.1	Wheat	cytosol	77.73	70.66
GSMUA_Achr1P08310_001	Banana	cytosol	56.82	59.81
GSMUA_Achr4P33140_001	Banana	cytosol	54.55	55.56
Solyc04g080190.2.1	Tomato	endoplasmic reticulum, nucleus	49.55	51.42
PGSC0003DMT400013168	Potato	cytosol	49.09	50.94
CDX71532	Canola	cytosol	48.18	49.53
Bra035335.1-P	Field mustard	cytosol	47.73	49.3
CDY02425	Canola	cytosol	47.73	49.3
Bra033653.1-P	Field mustard	cytosol	47.27	49.06
CDY22375	Canola	cytosol	47.27	49.06
CDY61017	Canola	cytosol	47.27	48.83
KRH15230	Soybean	cytosol	46.36	47.66
AT5G42960.1	Thale cress	cytosol	45.91	47.42
KRH38143	Soybean	endoplasmic reticulum	45.91	47.2
PGSC0003DMT400039959	Potato	cytosol	45.45	45.66
Solyc12g089100.1.1	Tomato	cytosol	45.0	45.41
AT1G45170.1	Thale cress	cytosol, plastid	43.64	45.07
VIT_18s0001g12290.t01	Wine grape	cytosol	43.18	44.6
HORVU5Hr1G124350.2	Barley	nucleus	72.27	40.36
PGSC0003DMT400033045	Potato	cytosol	35.45	39.2

Protein Annotations

EMBL:BT065034	EnsemblPlants:Zm00001d034890_P001	EnsemblPlants:Zm00001d034890_T001	EnsemblPlantsGene:Zm00001d034890	EntrezGene:100382679	GO:GO:0003674
GO:GO:0005215	GO:GO:0006810	GO:GO:0008150	GO:GO:0022843	GO:GO:0034220	GO:GO:0034765
GO:GO:0098655	InterPro:OEP24	PANTHER:PTHR35284	PANTHER:PTHR35284:SF1	ProteinID:ONM11684.1	SEG:seg
UniParc:UPI000194B25D	UniProt:C0P9R5	MapMan:24.4.4	:	:	:

Description

Outer envelope pore protein 24A chloroplastic

Coordinates

chr1:+:304868663..304870630

Molecular Weight (calculated)

23583.1 Da

IEP (calculated)

9.736

GRAVY (calculated)

-0.204

Length

220 amino acids

Sequence
(BLAST)

001: MKATLKGRYE GDKATAATSL AAPAGDLRLK ASATEAVFAN GPSLRGLTLT LEKPGAFLVD LKPHNQDVRF QFMKSALVLD KRVSLTYTHS TSLAAPAPPS
101: RTTLDCTATF DPANKVSLSH TLGSGGCRVK YTYAHGVERL TTIEPLFDTN KNAWEFAVTR KLAGGDAVKG TYAATTKLLG LEWSRDSIAG GSLKVATMFD
201: LSDQPKAPKL IAESTWNYEI

Best Arabidopsis Sequence Match ( AT5G42960.1 )
(BLAST)

001: MAMKASIKGK YDTDKTSGIG SLAFNAGDIK LRATMTDATL VAGPTLTGLA LAVEKPGSFI VEYNVPKKDV RFQFMNTVRI AEKPLNLTYI HSRADNRTIV
101: DGSLVIDSAN KLSANHMVGT NNCKIKYTYA HGGLATFEPC YDLAKNTWDF AVSRRFYSGD NVRATYQTSS KLLGMEWSRN NKASGFKVCA SVNLADELKT
201: PKLTAETTWN LEM

Arabidopsis Description

OEP24BOuter envelope pore protein 24B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.