CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034890_P001	Maize	cytosol	86.28	88.64
Os03t0855600-02	Rice	plastid	75.66	76.34
TraesCS4A01G320500.1	Wheat	plastid	79.2	73.97
TraesCS5D01G564700.1	Wheat	plastid	79.2	73.97
TraesCS5B01G558300.1	Wheat	cytosol	78.32	73.14
GSMUA_Achr1P08310_001	Banana	cytosol	55.75	60.29
GSMUA_Achr4P33140_001	Banana	cytosol	53.54	56.02
CDX71532	Canola	cytosol	47.35	50.0
Solyc04g080190.2.1	Tomato	endoplasmic reticulum, nucleus	46.9	50.0
PGSC0003DMT400013168	Potato	cytosol	46.46	49.53
CDY02425	Canola	cytosol	46.02	48.83
Bra035335.1-P	Field mustard	cytosol	46.02	48.83
CDY22375	Canola	cytosol	45.58	48.58
Bra033653.1-P	Field mustard	cytosol	45.58	48.58
CDY61017	Canola	cytosol	45.58	48.36
KRH15230	Soybean	cytosol	45.58	48.13
KRH38143	Soybean	endoplasmic reticulum	45.13	47.66
AT5G42960.1	Thale cress	cytosol	44.69	47.42
VIT_18s0001g12290.t01	Wine grape	cytosol	43.36	46.01
AT1G45170.1	Thale cress	cytosol, plastid	42.04	44.6
Solyc12g089100.1.1	Tomato	cytosol	42.92	44.5
PGSC0003DMT400039959	Potato	cytosol	42.48	43.84
HORVU5Hr1G124350.2	Barley	nucleus	72.12	41.37
PGSC0003DMT400033045	Potato	cytosol	34.51	39.2

Protein Annotations

EnsemblPlants:EER93070	EnsemblPlantsGene:SORBI_3001G006400	EntrezGene:8061386	GO:GO:0003674	GO:GO:0005215	GO:GO:0006810
GO:GO:0008150	GO:GO:0022843	GO:GO:0034220	GO:GO:0034765	GO:GO:0098655	InterPro:OEP24
PANTHER:PTHR35284	PANTHER:PTHR35284:SF1	ProteinID:EER93070	ProteinID:EER93070.2	RefSeq:XP_002466072.1	SEG:seg
unigene:Sbi.5786	UniParc:UPI000B42579E	UniProt:C5WRY9	MapMan:24.4.4	:	:

Description

hypothetical protein

Coordinates

chr1:-:583778..588934

Molecular Weight (calculated)

24179.6 Da

IEP (calculated)

9.557

GRAVY (calculated)

-0.219

Length

226 amino acids

Sequence
(BLAST)

001: MKATLKGRYE GDKATAATTL AAPAGDLRFK ASATEAAFAN GPSLRGLTLT LEKPGAFLVD LKPHNQDVRF QFMNSALVLD KRVSLTYTHS TSFAPAPAPP
101: AAALPSRTAL DCSVTFDPAN KVTLSHSLGS GGCRVKYTYA HGVDRLTTIE PLFDTNKNAW EFAVTKKFTG GDTVKGTYAA STKLFGLEWS RDSIAGGSFK
201: VGTTFDLSDQ SKAPKLIAES TWNYEI

Best Arabidopsis Sequence Match ( AT5G42960.1 )
(BLAST)

001: MAMKASIKGK YDTDKTSGIG SLAFNAGDIK LRATMTDATL VAGPTLTGLA LAVEKPGSFI VEYNVPKKDV RFQFMNTVRI AEKPLNLTYI HSRADNRTIV
101: DGSLVIDSAN KLSANHMVGT NNCKIKYTYA HGGLATFEPC YDLAKNTWDF AVSRRFYSGD NVRATYQTSS KLLGMEWSRN NKASGFKVCA SVNLADELKT
201: PKLTAETTWN LEM

Arabidopsis Description

OEP24BOuter envelope pore protein 24B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.