Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035335.1-P | Field mustard | cytosol | 85.45 | 85.45 |
| CDY02425 | Canola | cytosol | 84.98 | 84.98 |
| CDY61017 | Canola | cytosol | 84.51 | 84.51 |
| CDY22375 | Canola | cytosol | 81.69 | 82.08 |
| Bra033653.1-P | Field mustard | cytosol | 81.22 | 81.6 |
| CDX71532 | Canola | cytosol | 81.69 | 81.31 |
| AT1G45170.1 | Thale cress | cytosol, plastid | 76.06 | 76.06 |
| KRH15230 | Soybean | cytosol | 68.54 | 68.22 |
| KRH38143 | Soybean | endoplasmic reticulum | 68.08 | 67.76 |
| PGSC0003DMT400013168 | Potato | cytosol | 64.79 | 65.09 |
| Solyc04g080190.2.1 | Tomato | endoplasmic reticulum, nucleus | 64.79 | 65.09 |
| GSMUA_Achr1P08310_001 | Banana | cytosol | 54.93 | 55.98 |
| Solyc12g089100.1.1 | Tomato | cytosol | 57.28 | 55.96 |
| VIT_18s0001g12290.t01 | Wine grape | cytosol | 55.87 | 55.87 |
| PGSC0003DMT400039959 | Potato | cytosol | 56.81 | 55.25 |
| GSMUA_Achr4P33140_001 | Banana | cytosol | 54.93 | 54.17 |
| Os03t0855600-02 | Rice | plastid | 50.7 | 48.21 |
| Zm00001d012820_P001 | Maize | plastid | 48.83 | 46.64 |
| Zm00001d034890_P001 | Maize | cytosol | 47.42 | 45.91 |
| EER93070 | Sorghum | cytosol | 47.42 | 44.69 |
| TraesCS4A01G320500.1 | Wheat | plastid | 50.7 | 44.63 |
| TraesCS5D01G564700.1 | Wheat | plastid | 50.23 | 44.21 |
| TraesCS5B01G558300.1 | Wheat | cytosol | 49.77 | 43.8 |
| HORVU5Hr1G124350.2 | Barley | nucleus | 46.48 | 25.13 |
Protein Annotations
| MapMan:24.4.4 | EntrezGene:834310 | ProteinID:AED94894.1 | ArrayExpress:AT5G42960 | EnsemblPlantsGene:AT5G42960 | RefSeq:AT5G42960 |
| TAIR:AT5G42960 | RefSeq:AT5G42960-TAIR-G | EnsemblPlants:AT5G42960.1 | TAIR:AT5G42960.1 | EMBL:AY054647 | Unigene:At.6529 |
| ProteinID:BAB09198.1 | EMBL:BT001163 | EMBL:DQ487722 | EMBL:DQ653343 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006810 |
| GO:GO:0006811 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009527 | GO:GO:0009536 | GO:GO:0009707 |
| GO:GO:0009941 | GO:GO:0015288 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022843 | GO:GO:0031359 |
| GO:GO:0034220 | GO:GO:0034426 | GO:GO:0034765 | GO:GO:0046930 | GO:GO:0055085 | GO:GO:0098655 |
| RefSeq:NP_568618.1 | InterPro:OEP24 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR35284 | PANTHER:PTHR35284:SF1 | UniProt:Q8H0Y1 |
| UniParc:UPI00000ADB30 | : | : | : | : | : |
Description
OEP24BOuter envelope pore protein 24B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y1]
Coordinates
chr5:+:17235092..17236679
Molecular Weight (calculated)
23412.0 Da
IEP (calculated)
9.648
GRAVY (calculated)
-0.271
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMKASIKGK YDTDKTSGIG SLAFNAGDIK LRATMTDATL VAGPTLTGLA LAVEKPGSFI VEYNVPKKDV RFQFMNTVRI AEKPLNLTYI HSRADNRTIV
101: DGSLVIDSAN KLSANHMVGT NNCKIKYTYA HGGLATFEPC YDLAKNTWDF AVSRRFYSGD NVRATYQTSS KLLGMEWSRN NKASGFKVCA SVNLADELKT
201: PKLTAETTWN LEM
101: DGSLVIDSAN KLSANHMVGT NNCKIKYTYA HGGLATFEPC YDLAKNTWDF AVSRRFYSGD NVRATYQTSS KLLGMEWSRN NKASGFKVCA SVNLADELKT
201: PKLTAETTWN LEM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.