Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G42960.1 | Thale cress | cytosol | 76.06 | 76.06 |
| Solyc04g080190.2.1 | Tomato | endoplasmic reticulum, nucleus | 66.2 | 66.51 |
| KRH38143 | Soybean | endoplasmic reticulum | 66.67 | 66.36 |
| KRH15230 | Soybean | cytosol | 66.2 | 65.89 |
| PGSC0003DMT400013168 | Potato | cytosol | 65.26 | 65.57 |
| GSMUA_Achr1P08310_001 | Banana | cytosol | 57.75 | 58.85 |
| GSMUA_Achr4P33140_001 | Banana | cytosol | 59.15 | 58.33 |
| Solyc12g089100.1.1 | Tomato | cytosol | 59.62 | 58.26 |
| PGSC0003DMT400039959 | Potato | cytosol | 59.62 | 57.99 |
| VIT_18s0001g12290.t01 | Wine grape | cytosol | 57.28 | 57.28 |
| Os03t0855600-02 | Rice | plastid | 48.36 | 45.98 |
| Zm00001d012820_P001 | Maize | plastid | 46.95 | 44.84 |
| Zm00001d034890_P001 | Maize | cytosol | 45.07 | 43.64 |
| TraesCS4A01G320500.1 | Wheat | plastid | 47.89 | 42.15 |
| EER93070 | Sorghum | cytosol | 44.6 | 42.04 |
| TraesCS5D01G564700.1 | Wheat | plastid | 47.42 | 41.74 |
| TraesCS5B01G558300.1 | Wheat | cytosol | 46.48 | 40.91 |
| HORVU5Hr1G124350.2 | Barley | nucleus | 44.6 | 24.11 |
Protein Annotations
| MapMan:24.4.4 | EntrezGene:841085 | ProteinID:AAF69166.1 | ProteinID:AEE32089.1 | ProteinID:AEE32090.1 | EMBL:AK118473 |
| ArrayExpress:AT1G45170 | EnsemblPlantsGene:AT1G45170 | RefSeq:AT1G45170 | TAIR:AT1G45170 | RefSeq:AT1G45170-TAIR-G | EnsemblPlants:AT1G45170.1 |
| TAIR:AT1G45170.1 | Unigene:At.38727 | EMBL:BT025535 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 |
| GO:GO:0009507 | GO:GO:0009527 | GO:GO:0009536 | GO:GO:0009707 | GO:GO:0015288 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022843 | GO:GO:0031359 | GO:GO:0034220 | GO:GO:0034426 | GO:GO:0034765 |
| GO:GO:0046930 | GO:GO:0055085 | GO:GO:0098655 | RefSeq:NP_001077680.1 | RefSeq:NP_175131.3 | InterPro:OEP24 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR35284 | PANTHER:PTHR35284:SF1 | UniProt:Q1H5C9 | UniParc:UPI00005DC1C8 |
Description
OEP24AOuter envelope pore protein 24A, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q1H5C9]
Coordinates
chr1:-:17095980..17098041
Molecular Weight (calculated)
23592.4 Da
IEP (calculated)
9.620
GRAVY (calculated)
-0.238
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKASFKGKF DVDKSGSVAS LTFNAGNAKL RATMTDASFV AGPSFNGLSL AVEKPGFFII DYNVPKKDVR FQFMNTIRIA EKPLNLTYIH MRGDNRTIVD
101: GSFVIDPANK LSANYMVGTK NCKLKYTYVH GGIATFEPCY DVAKNMWDFA ISHKLYGGDN LKATYQTSSK MLGLEWSNNS KSTGSFKVCA SMNLAEELKP
201: PKLTAETTWN LEL
101: GSFVIDPANK LSANYMVGTK NCKLKYTYVH GGIATFEPCY DVAKNMWDFA ISHKLYGGDN LKATYQTSSK MLGLEWSNNS KSTGSFKVCA SMNLAEELKP
201: PKLTAETTWN LEL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.