Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G564700.1 | Wheat | plastid | 98.76 | 98.76 |
| TraesCS4A01G320500.1 | Wheat | plastid | 98.35 | 98.35 |
| Zm00001d012820_P001 | Maize | plastid | 73.55 | 79.82 |
| EER93070 | Sorghum | cytosol | 73.14 | 78.32 |
| Zm00001d034890_P001 | Maize | cytosol | 70.66 | 77.73 |
| Os03t0855600-02 | Rice | plastid | 69.01 | 74.55 |
| GSMUA_Achr1P08310_001 | Banana | cytosol | 52.89 | 61.24 |
| GSMUA_Achr4P33140_001 | Banana | cytosol | 50.83 | 56.94 |
| HORVU5Hr1G124350.2 | Barley | nucleus | 87.6 | 53.81 |
| PGSC0003DMT400013168 | Potato | cytosol | 46.28 | 52.83 |
| Solyc04g080190.2.1 | Tomato | endoplasmic reticulum, nucleus | 45.87 | 52.36 |
| CDX71532 | Canola | cytosol | 45.87 | 51.87 |
| CDY02425 | Canola | cytosol | 45.04 | 51.17 |
| Bra035335.1-P | Field mustard | cytosol | 45.04 | 51.17 |
| CDY22375 | Canola | cytosol | 44.63 | 50.94 |
| Bra033653.1-P | Field mustard | cytosol | 44.63 | 50.94 |
| CDY61017 | Canola | cytosol | 44.63 | 50.7 |
| AT5G42960.1 | Thale cress | cytosol | 43.8 | 49.77 |
| KRH15230 | Soybean | cytosol | 42.98 | 48.6 |
| KRH38143 | Soybean | endoplasmic reticulum | 42.56 | 48.13 |
| Solyc12g089100.1.1 | Tomato | cytosol | 42.15 | 46.79 |
| AT1G45170.1 | Thale cress | cytosol, plastid | 40.91 | 46.48 |
| PGSC0003DMT400039959 | Potato | cytosol | 41.74 | 46.12 |
| VIT_18s0001g12290.t01 | Wine grape | cytosol | 39.26 | 44.6 |
| PGSC0003DMT400033045 | Potato | cytosol | 33.06 | 40.2 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G558300.1 | EnsemblPlantsGene:TraesCS5B01G558300 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0022843 | GO:GO:0034765 | InterPro:OEP24 | PANTHER:PTHR35284 | PANTHER:PTHR35284:SF1 | SEG:seg |
| MapMan:24.4.4 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:705798864..705805588
Molecular Weight (calculated)
25262.9 Da
IEP (calculated)
9.970
GRAVY (calculated)
-0.190
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MKATVKGRYE GDKATAAATV ALAAAGDLRL RASATDAAFA AGPSLDGLTI TLEKPGAFLL NLKPHNQDVR FQFMNSATVL DKRVSLTYTH STSLAPAAPK
101: PAIPAPAAGA APAPPPKGPP PGRTALDLSI AFDPANKVSV SHALGGGGCR VKYTYAHGAG RLTTIEPVYD TAKNAWEFAV ARKFDAGDTV RGTYQASTKQ
201: LGLEWTRSSS IGGSFKVATT FDLSDQSKAP KLVAESTWNY EI
101: PAIPAPAAGA APAPPPKGPP PGRTALDLSI AFDPANKVSV SHALGGGGCR VKYTYAHGAG RLTTIEPVYD TAKNAWEFAV ARKFDAGDTV RGTYQASTKQ
201: LGLEWTRSSS IGGSFKVATT FDLSDQSKAP KLVAESTWNY EI
001: MAMKASIKGK YDTDKTSGIG SLAFNAGDIK LRATMTDATL VAGPTLTGLA LAVEKPGSFI VEYNVPKKDV RFQFMNTVRI AEKPLNLTYI HSRADNRTIV
101: DGSLVIDSAN KLSANHMVGT NNCKIKYTYA HGGLATFEPC YDLAKNTWDF AVSRRFYSGD NVRATYQTSS KLLGMEWSRN NKASGFKVCA SVNLADELKT
201: PKLTAETTWN LEM
101: DGSLVIDSAN KLSANHMVGT NNCKIKYTYA HGGLATFEPC YDLAKNTWDF AVSRRFYSGD NVRATYQTSS KLLGMEWSRN NKASGFKVCA SVNLADELKT
201: PKLTAETTWN LEM
Arabidopsis Description
OEP24BOuter envelope pore protein 24B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.