CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38143	Soybean	endoplasmic reticulum	99.53	99.53
AT5G42960.1	Thale cress	cytosol	68.22	68.54
PGSC0003DMT400013168	Potato	cytosol	67.76	68.4
CDY22375	Canola	cytosol	67.29	67.92
Bra033653.1-P	Field mustard	cytosol	66.82	67.45
CDX71532	Canola	cytosol	67.29	67.29
Solyc04g080190.2.1	Tomato	endoplasmic reticulum, nucleus	66.36	66.98
AT1G45170.1	Thale cress	cytosol, plastid	65.89	66.2
Bra035335.1-P	Field mustard	cytosol	65.42	65.73
CDY02425	Canola	cytosol	65.42	65.73
CDY61017	Canola	cytosol	64.95	65.26
VIT_18s0001g12290.t01	Wine grape	cytosol	62.62	62.91
Solyc12g089100.1.1	Tomato	cytosol	58.88	57.8
PGSC0003DMT400039959	Potato	cytosol	58.41	57.08
GSMUA_Achr1P08310_001	Banana	cytosol	55.14	56.46
GSMUA_Achr4P33140_001	Banana	cytosol	56.07	55.56
Zm00001d012820_P001	Maize	plastid	49.53	47.53
Os03t0855600-02	Rice	plastid	49.53	47.32
Zm00001d034890_P001	Maize	cytosol	47.66	46.36
EER93070	Sorghum	cytosol	48.13	45.58
TraesCS5D01G564700.1	Wheat	plastid	49.53	43.8
TraesCS4A01G320500.1	Wheat	plastid	49.07	43.39
TraesCS5B01G558300.1	Wheat	cytosol	48.6	42.98
HORVU5Hr1G124350.2	Barley	nucleus	44.86	24.37

Protein Annotations

EMBL:ACUP02008569	EnsemblPlants:KRH15230	EnsemblPlantsGene:GLYMA_14G076000	EntrezGene:100802815	GO:GO:0003674	GO:GO:0005215
GO:GO:0006810	GO:GO:0008150	GO:GO:0022843	GO:GO:0034220	GO:GO:0034765	GO:GO:0098655
InterPro:OEP24	PANTHER:PTHR35284	PANTHER:PTHR35284:SF3	ProteinID:KRH15230	ProteinID:KRH15230.1	UniParc:UPI000233B3F4
UniProt:I1M8E3	MapMan:24.4.4	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:6371619..6374291

Molecular Weight (calculated)

23693.9 Da

IEP (calculated)

9.702

GRAVY (calculated)

-0.335

Length

214 amino acids

Sequence
(BLAST)

001: MKATLKGKYD VDKNGAAFAN IAVNAGDVKF RASVTEATFI NGPSLTGLAL AVEKPGSFIV DYNVPKKDFR FQFMNTVRVG ERPLNLTYAH SRGDNRTVLD
101: GTFVYDSANK VSANYALDSG NCKLKYTYVH KGLTTFEPAY DVAKNTWDFA VSRRVYGGDD TLRASYQTSS RVLGVEWSRN PKHTAGFKIV ASVNLAEEFK
201: APKLVAETTW NFEM

Best Arabidopsis Sequence Match ( AT5G42960.1 )
(BLAST)

001: MAMKASIKGK YDTDKTSGIG SLAFNAGDIK LRATMTDATL VAGPTLTGLA LAVEKPGSFI VEYNVPKKDV RFQFMNTVRI AEKPLNLTYI HSRADNRTIV
101: DGSLVIDSAN KLSANHMVGT NNCKIKYTYA HGGLATFEPC YDLAKNTWDF AVSRRFYSGD NVRATYQTSS KLLGMEWSRN NKASGFKVCA SVNLADELKT
201: PKLTAETTWN LEM

Arabidopsis Description

OEP24BOuter envelope pore protein 24B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.