Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22375 | Canola | cytosol | 93.46 | 94.34 |
| CDY02425 | Canola | cytosol | 91.59 | 92.02 |
| CDY61017 | Canola | cytosol | 91.12 | 91.55 |
| AT5G42960.1 | Thale cress | cytosol | 81.31 | 81.69 |
| Solyc04g080190.2.1 | Tomato | endoplasmic reticulum, nucleus | 67.29 | 67.92 |
| KRH15230 | Soybean | cytosol | 67.29 | 67.29 |
| PGSC0003DMT400013168 | Potato | cytosol | 66.36 | 66.98 |
| KRH38143 | Soybean | endoplasmic reticulum | 66.82 | 66.82 |
| GSMUA_Achr1P08310_001 | Banana | cytosol | 57.94 | 59.33 |
| VIT_18s0001g12290.t01 | Wine grape | cytosol | 58.41 | 58.69 |
| GSMUA_Achr4P33140_001 | Banana | cytosol | 58.41 | 57.87 |
| PGSC0003DMT400039959 | Potato | cytosol | 57.94 | 56.62 |
| Solyc12g089100.1.1 | Tomato | cytosol | 57.48 | 56.42 |
| Os03t0855600-02 | Rice | plastid | 51.4 | 49.11 |
| Zm00001d012820_P001 | Maize | plastid | 50.93 | 48.88 |
| Zm00001d034890_P001 | Maize | cytosol | 49.53 | 48.18 |
| EER93070 | Sorghum | cytosol | 50.0 | 47.35 |
| TraesCS4A01G320500.1 | Wheat | plastid | 52.34 | 46.28 |
| TraesCS5D01G564700.1 | Wheat | plastid | 52.34 | 46.28 |
| TraesCS5B01G558300.1 | Wheat | cytosol | 51.87 | 45.87 |
| HORVU5Hr1G124350.2 | Barley | nucleus | 49.53 | 26.9 |
Protein Annotations
| EnsemblPlants:CDX71532 | EnsemblPlantsGene:GSBRNA2T00148490001 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0022843 | GO:GO:0034765 | InterPro:OEP24 | PANTHER:PTHR35284 | PANTHER:PTHR35284:SF1 | ProteinID:CDX71532 |
| ProteinID:CDX71532.1 | UniParc:UPI0004EC4B95 | MapMan:24.4.4 | : | : | : |
Description
BnaC04g17670D
Coordinates
chrLK031793:+:2432586..2433733
Molecular Weight (calculated)
23514.1 Da
IEP (calculated)
9.716
GRAVY (calculated)
-0.247
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKASVKGKY DGGKSTGVGS VAFNAGDIKL RATMTDATFV AGPSLNGLSL AVEKPGFFIV EYNVPKKDVR FQFMNTVRVA EKPLNLTYIH SRADNRTIVD
101: GSLLIDPANK VSANYMVGTN NCKLKYTYAR GKIATFEPCY DFAKNAWDFA VSKRVYGDED VVKATYQTST KLLGVEWSRN SKSTGSFKVC ASVNLAEEVK
201: TPKLTAETTW NLEI
101: GSLLIDPANK VSANYMVGTN NCKLKYTYAR GKIATFEPCY DFAKNAWDFA VSKRVYGDED VVKATYQTST KLLGVEWSRN SKSTGSFKVC ASVNLAEEVK
201: TPKLTAETTW NLEI
001: MAMKASIKGK YDTDKTSGIG SLAFNAGDIK LRATMTDATL VAGPTLTGLA LAVEKPGSFI VEYNVPKKDV RFQFMNTVRI AEKPLNLTYI HSRADNRTIV
101: DGSLVIDSAN KLSANHMVGT NNCKIKYTYA HGGLATFEPC YDLAKNTWDF AVSRRFYSGD NVRATYQTSS KLLGMEWSRN NKASGFKVCA SVNLADELKT
201: PKLTAETTWN LEM
101: DGSLVIDSAN KLSANHMVGT NNCKIKYTYA HGGLATFEPC YDLAKNTWDF AVSRRFYSGD NVRATYQTSS KLLGMEWSRN NKASGFKVCA SVNLADELKT
201: PKLTAETTWN LEM
Arabidopsis Description
OEP24BOuter envelope pore protein 24B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.