Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400062841 | Potato | plastid | 96.11 | 90.48 |
| Solyc06g071180.2.1 | Tomato | cytosol | 66.54 | 63.57 |
| VIT_17s0000g05380.t01 | Wine grape | cytosol | 44.75 | 62.16 |
| Solyc01g005460.2.1 | Tomato | cytosol | 21.79 | 43.08 |
| KRH03396 | Soybean | cytosol | 43.19 | 42.86 |
| KRH56986 | Soybean | cytosol | 43.19 | 42.05 |
| Solyc12g044240.1.1 | Tomato | cytosol | 14.79 | 40.43 |
| Solyc03g120690.2.1 | Tomato | cytosol | 14.4 | 39.36 |
| Solyc07g063180.2.1 | Tomato | cytosol | 21.79 | 38.1 |
| Solyc07g063610.2.1 | Tomato | cytosol | 16.73 | 38.05 |
| Zm00001d009402_P001 | Maize | cytosol, mitochondrion | 25.68 | 36.67 |
| Solyc01g066590.2.1 | Tomato | cytosol, extracellular | 16.34 | 35.29 |
| Solyc12g006630.1.1 | Tomato | cytosol | 30.74 | 35.27 |
| OQU86998 | Sorghum | cytosol, mitochondrion | 25.29 | 34.39 |
| Os01t0555600-00 | Rice | cytosol | 26.85 | 32.39 |
Protein Annotations
| Gene3D:3.30.740.10 | MapMan:35.2 | InterPro:DLC_sf | InterPro:Dynein_light_chain_typ-1/2 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005856 | GO:GO:0005868 | GO:GO:0006810 | GO:GO:0007017 | GO:GO:0008092 | GO:GO:0008150 |
| GO:GO:0008574 | GO:GO:0009987 | GO:GO:0010970 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0030286 |
| GO:GO:0045505 | GO:GO:0051959 | GO:GO:0060271 | GO:GO:2000582 | InterPro:IPR037177 | UniProt:K4BKK6 |
| PFAM:PF01221 | PANTHER:PTHR11886 | PANTHER:PTHR11886:SF37 | SMART:SM01375 | SUPFAM:SSF54648 | EnsemblPlantsGene:Solyc03g113540.2 |
| EnsemblPlants:Solyc03g113540.2.1 | UniParc:UPI0002767C25 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3:+:63651116..63652253
Molecular Weight (calculated)
28618.4 Da
IEP (calculated)
10.220
GRAVY (calculated)
-0.456
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPTLKKQPK PTPFSATTPT IQNISSHFSK LYANHKILKS GHRHPPPVDT HLQAKTLAAA YDSSCSALTK SKSQHGRRYV HKDVDKAVVL QEKGEIKKIP
101: NKEKELKKEV DVKRALALLS KNQDSEKGFK QRPSFSLSMN GGGRRKSFCC SETELADFFS CSAVKVVSVD MPPFMQIHAV DFARKAHDSL EKFSSKSLGF
201: SLKKEFDGVY GPAWHCIVGT SFGSFVTHSV GGFIYFSMDH KLYVLLFKTT VQKAESS
101: NKEKELKKEV DVKRALALLS KNQDSEKGFK QRPSFSLSMN GGGRRKSFCC SETELADFFS CSAVKVVSVD MPPFMQIHAV DFARKAHDSL EKFSSKSLGF
201: SLKKEFDGVY GPAWHCIVGT SFGSFVTHSV GGFIYFSMDH KLYVLLFKTT VQKAESS
001: MNEERPKKSK KKSLMNFYKF SITSSKHSLI NPKSKPKIPI STPSISQQEV EEKPIVQSNK SHQNHVMRDI FELETTCSRN NERKKGGGAA EEGRKSVSHV
101: ERDTAARIEA AAEMLTVRIL AADMPGFMQA HAFRCARMTL DSLEKFSSKH MAFNLKKEFD KGYGPAWHCI VGSSFGSFVT HSTGCFIYFS MDKLYVLLFK
201: TKVRPASPH
101: ERDTAARIEA AAEMLTVRIL AADMPGFMQA HAFRCARMTL DSLEKFSSKH MAFNLKKEFD KGYGPAWHCI VGSSFGSFVT HSTGCFIYFS MDKLYVLLFK
201: TKVRPASPH
Arabidopsis Description
At5g20110 [Source:UniProtKB/TrEMBL;Acc:Q6NM36]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.