Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400019607 | Potato | cytosol | 98.94 | 98.94 |
| Solyc03g120690.2.1 | Tomato | cytosol | 89.36 | 89.36 |
| VIT_09s0002g04280.t01 | Wine grape | cytosol | 89.36 | 88.42 |
| GSMUA_Achr2P19900_001 | Banana | cytosol | 85.11 | 86.02 |
| KRH09878 | Soybean | cytosol | 85.11 | 84.21 |
| KRH23441 | Soybean | cytosol | 84.04 | 83.16 |
| CDY02551 | Canola | cytosol | 82.98 | 82.98 |
| AT1G52245.1 | Thale cress | cytosol | 82.98 | 82.98 |
| Bra014318.1-P | Field mustard | cytosol | 82.98 | 82.98 |
| Bra018957.1-P | Field mustard | cytosol | 81.91 | 81.91 |
| GSMUA_Achr10P... | Banana | cytosol | 80.85 | 81.72 |
| CDX97722 | Canola | cytosol | 77.66 | 78.49 |
| Bra027190.1-P | Field mustard | cytosol | 77.66 | 78.49 |
| GSMUA_Achr7P14400_001 | Banana | cytosol | 77.66 | 78.49 |
| AT3G16120.1 | Thale cress | cytosol | 77.66 | 78.49 |
| CDY30135 | Canola | cytosol | 76.6 | 77.42 |
| GSMUA_Achr7P25190_001 | Banana | cytosol | 75.53 | 76.34 |
| KXG33416 | Sorghum | cytosol | 73.4 | 74.19 |
| Zm00001d043386_P001 | Maize | cytosol | 72.34 | 73.12 |
| GSMUA_Achr10P... | Banana | cytosol | 76.6 | 70.59 |
| TraesCS3D01G296300.1 | Wheat | cytosol | 73.4 | 69.7 |
| TraesCS3B01G330900.1 | Wheat | cytosol | 72.34 | 68.69 |
| TraesCS3A01G305600.1 | Wheat | cytosol | 72.34 | 68.69 |
| Os02t0269200-01 | Rice | cytosol | 71.28 | 67.68 |
| TraesCS1D01G203800.1 | Wheat | cytosol | 71.28 | 67.68 |
| TraesCS2A01G245600.1 | Wheat | cytosol | 70.21 | 66.67 |
| TraesCS1B01G110900.1 | Wheat | cytosol | 70.21 | 66.67 |
| HORVU3Hr1G073190.1 | Barley | cytosol | 73.4 | 66.35 |
| TraesCS2B01G143000.1 | Wheat | cytosol | 69.15 | 65.66 |
| EES06648 | Sorghum | cytosol | 68.09 | 64.65 |
| TraesCS2B01G427400.1 | Wheat | cytosol | 67.02 | 63.64 |
| TraesCS5B01G340700.1 | Wheat | cytosol | 67.02 | 63.64 |
| TraesCS7D01G056400.1 | Wheat | cytosol | 68.09 | 60.95 |
| TraesCS7A01G061500.1 | Wheat | cytosol | 68.09 | 60.95 |
| TraesCS4A01G427300.1 | Wheat | cytosol | 68.09 | 60.95 |
| TraesCS7A01G284100.1 | Wheat | cytosol, plastid | 55.32 | 59.77 |
| CDY47528 | Canola | cytosol | 75.53 | 54.62 |
| Zm00001d016016_P001 | Maize | cytosol | 68.09 | 53.33 |
| TraesCS4A01G428300.1 | Wheat | cytosol | 68.09 | 47.76 |
| Solyc07g063610.2.1 | Tomato | cytosol | 52.13 | 43.36 |
| HORVU7Hr1G011400.2 | Barley | plastid | 69.15 | 40.12 |
| Solyc01g066590.2.1 | Tomato | cytosol, extracellular | 38.3 | 30.25 |
| Solyc07g063180.2.1 | Tomato | cytosol | 42.55 | 27.21 |
| Solyc01g005460.2.1 | Tomato | cytosol | 34.04 | 24.62 |
| Solyc12g006630.1.1 | Tomato | cytosol | 42.55 | 17.86 |
| Solyc03g113540.2.1 | Tomato | cytosol, plastid | 40.43 | 14.79 |
| Solyc06g071180.2.1 | Tomato | cytosol | 37.23 | 13.01 |
Protein Annotations
| Gene3D:3.30.740.10 | MapMan:35.1 | InterPro:DLC_sf | InterPro:Dynein_light_chain_typ-1/2 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005868 | GO:GO:0005874 | GO:GO:0006810 | GO:GO:0007017 |
| GO:GO:0008092 | GO:GO:0008150 | GO:GO:0008574 | GO:GO:0009987 | GO:GO:0010970 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0030286 | GO:GO:0045505 | GO:GO:0051959 | GO:GO:0060271 | GO:GO:2000582 |
| InterPro:IPR037177 | UniProt:K4DFB2 | PFAM:PF01221 | PANTHER:PTHR11886 | PANTHER:PTHR11886:SF47 | SMART:SM01375 |
| SUPFAM:SSF54648 | EnsemblPlantsGene:Solyc12g044240.1 | EnsemblPlants:Solyc12g044240.1.1 | UniParc:UPI00027695AD | : | : |
Description
No Description!
Coordinates
chr12:-:38736614..38737013
Molecular Weight (calculated)
10502.7 Da
IEP (calculated)
6.495
GRAVY (calculated)
0.056
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MLEGKALIED TDMPVKMQIQ AMSYASQALD LYDVLDCKSI AAHIKKEFDK KYGGGWQCVV GSNFGCFFTH TKGTFIYFTL ETLNFLIFKG ASSP
1: MLEGKAMVED SDMPVKMQMQ AMAFASQALD LFDVFDCKSI AGHIKKEFDE RYGSGWQCVV GSNFGCFFTH SKGTFIYFQL ETLKFLIFKG ASTP
Arabidopsis Description
At1g52250 [Source:UniProtKB/TrEMBL;Acc:Q9M810]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.