Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027190.1-P | Field mustard | cytosol | 90.32 | 90.32 |
| CDX97722 | Canola | cytosol | 90.32 | 90.32 |
| CDY30135 | Canola | cytosol | 89.25 | 89.25 |
| AT1G52245.1 | Thale cress | cytosol | 83.87 | 82.98 |
| Solyc12g044240.1.1 | Tomato | cytosol | 78.49 | 77.66 |
| GSMUA_Achr2P19900_001 | Banana | cytosol | 77.42 | 77.42 |
| PGSC0003DMT400019607 | Potato | cytosol | 77.42 | 76.6 |
| GSMUA_Achr10P... | Banana | cytosol | 76.34 | 76.34 |
| VIT_09s0002g04280.t01 | Wine grape | cytosol | 77.42 | 75.79 |
| KRH09878 | Soybean | cytosol | 77.42 | 75.79 |
| Solyc03g120690.2.1 | Tomato | cytosol | 76.34 | 75.53 |
| KRH23441 | Soybean | cytosol | 76.34 | 74.74 |
| PGSC0003DMT400006527 | Potato | cytosol | 75.27 | 74.47 |
| GSMUA_Achr7P25190_001 | Banana | cytosol | 73.12 | 73.12 |
| GSMUA_Achr7P14400_001 | Banana | cytosol | 70.97 | 70.97 |
| KXG33416 | Sorghum | cytosol | 69.89 | 69.89 |
| Zm00001d043386_P001 | Maize | cytosol | 68.82 | 68.82 |
| TraesCS3D01G296300.1 | Wheat | cytosol | 69.89 | 65.66 |
| TraesCS3B01G330900.1 | Wheat | cytosol | 68.82 | 64.65 |
| TraesCS3A01G305600.1 | Wheat | cytosol | 68.82 | 64.65 |
| GSMUA_Achr10P... | Banana | cytosol | 69.89 | 63.73 |
| Os02t0269200-01 | Rice | cytosol | 67.74 | 63.64 |
| TraesCS1D01G203800.1 | Wheat | cytosol | 67.74 | 63.64 |
| EES06648 | Sorghum | cytosol | 66.67 | 62.63 |
| TraesCS1B01G110900.1 | Wheat | cytosol | 66.67 | 62.63 |
| TraesCS2A01G245600.1 | Wheat | cytosol | 66.67 | 62.63 |
| TraesCS2B01G143000.1 | Wheat | cytosol | 65.59 | 61.62 |
| HORVU3Hr1G073190.1 | Barley | cytosol | 68.82 | 61.54 |
| TraesCS7A01G061500.1 | Wheat | cytosol | 68.82 | 60.95 |
| TraesCS5B01G340700.1 | Wheat | cytosol | 64.52 | 60.61 |
| TraesCS4A01G427300.1 | Wheat | cytosol | 67.74 | 60.0 |
| TraesCS7D01G056400.1 | Wheat | cytosol | 67.74 | 60.0 |
| TraesCS2B01G427400.1 | Wheat | cytosol | 63.44 | 59.6 |
| TraesCS7A01G284100.1 | Wheat | cytosol, plastid | 51.61 | 55.17 |
| Zm00001d016016_P001 | Maize | cytosol | 66.67 | 51.67 |
| AT4G27360.1 | Thale cress | cytosol | 54.84 | 49.51 |
| TraesCS4A01G428300.1 | Wheat | cytosol | 67.74 | 47.01 |
| HORVU7Hr1G011400.2 | Barley | plastid | 67.74 | 38.89 |
| AT1G23220.1 | Thale cress | cytosol | 37.63 | 27.13 |
| AT4G15930.1 | Thale cress | cytosol | 35.48 | 26.83 |
| AT5G20110.1 | Thale cress | cytosol | 46.24 | 20.57 |
Protein Annotations
| Gene3D:3.30.740.10 | MapMan:35.2 | EntrezGene:820857 | UniProt:A0A178VDE1 | ProteinID:AEE75774.1 | ProteinID:ANM63499.1 |
| ArrayExpress:AT3G16120 | EnsemblPlantsGene:AT3G16120 | RefSeq:AT3G16120 | TAIR:AT3G16120 | RefSeq:AT3G16120-TAIR-G | EnsemblPlants:AT3G16120.1 |
| TAIR:AT3G16120.1 | EMBL:AY086498 | ProteinID:BAB02678.1 | EMBL:BT028884 | InterPro:DLC_sf | InterPro:Dynein_light_chain_typ-1/2 |
| GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005868 | GO:GO:0005874 |
| GO:GO:0006810 | GO:GO:0007017 | GO:GO:0008092 | GO:GO:0008150 | GO:GO:0008574 | GO:GO:0009987 |
| GO:GO:0010970 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0030286 | GO:GO:0045505 | GO:GO:0051959 |
| GO:GO:0060271 | GO:GO:2000582 | InterPro:IPR037177 | RefSeq:NP_001325583.1 | RefSeq:NP_188233.1 | ProteinID:OAP02953.1 |
| PFAM:PF01221 | PO:PO:0000037 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 |
| PO:PO:0025022 | PANTHER:PTHR11886 | PANTHER:PTHR11886:SF47 | UniProt:Q9LW74 | SMART:SM01375 | SUPFAM:SSF54648 |
| UniParc:UPI00000A3427 | : | : | : | : | : |
Description
At3g16120 [Source:UniProtKB/TrEMBL;Acc:Q9LW74]
Coordinates
chr3:+:5464728..5465585
Molecular Weight (calculated)
10495.8 Da
IEP (calculated)
6.778
GRAVY (calculated)
0.100
Length
93 amino acids
Sequence
(BLAST)
(BLAST)
1: MLEGKAKVEE TDMPVKMQMQ AMKIASQSLD LFDVFDSISI AAHIKKEFDE RYGSGWQCVV GTNFGCFFTH SKGTFIYFHL GTLNFLIFKG ATL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.