Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY57865 | Canola | cytosol | 85.37 | 86.07 |
| Bra038059.1-P | Field mustard | cytosol | 86.18 | 85.48 |
| CDY24919 | Canola | cytosol | 86.18 | 85.48 |
| GSMUA_Achr11P... | Banana | cytosol | 48.78 | 77.92 |
| GSMUA_Achr8P30040_001 | Banana | cytosol | 47.15 | 75.32 |
| VIT_05s0077g02110.t01 | Wine grape | cytosol | 67.48 | 70.94 |
| Solyc01g066590.2.1 | Tomato | cytosol, extracellular | 63.41 | 65.55 |
| PGSC0003DMT400029467 | Potato | extracellular | 63.41 | 65.55 |
| EES00507 | Sorghum | cytosol | 63.41 | 60.0 |
| Zm00001d008330_P001 | Maize | mitochondrion | 59.35 | 59.84 |
| Os01t0256400-01 | Rice | cytosol, nucleus | 62.6 | 59.23 |
| Zm00001d040291_P001 | Maize | cytosol, mitochondrion | 60.98 | 58.59 |
| TraesCS3D01G180700.1 | Wheat | cytosol | 61.79 | 53.9 |
| TraesCS3B01G205000.1 | Wheat | cytosol | 61.79 | 53.9 |
| TraesCS3A01G175300.1 | Wheat | cytosol | 61.79 | 53.9 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.71 | 43.82 |
| OQU83188 | Sorghum | plastid | 43.09 | 42.06 |
| AT1G52245.1 | Thale cress | cytosol | 27.64 | 36.17 |
| AT3G16120.1 | Thale cress | cytosol | 26.83 | 35.48 |
| AT4G27360.1 | Thale cress | cytosol | 28.46 | 33.98 |
| Os06t0492700-00 | Rice | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 36.59 | 32.61 |
| AT1G23220.1 | Thale cress | cytosol | 29.27 | 27.91 |
| AT5G20110.1 | Thale cress | cytosol | 36.59 | 21.53 |
| KRH40946 | Soybean | plastid | 10.57 | 11.21 |
Protein Annotations
| Gene3D:3.30.740.10 | MapMan:35.1 | EntrezGene:827275 | UniProt:A0A178UW91 | ProteinID:AEE83667.1 | ProteinID:ANM67500.1 |
| ArrayExpress:AT4G15930 | EnsemblPlantsGene:AT4G15930 | RefSeq:AT4G15930 | TAIR:AT4G15930 | RefSeq:AT4G15930-TAIR-G | EnsemblPlants:AT4G15930.1 |
| TAIR:AT4G15930.1 | Unigene:At.25487 | EMBL:BT004785 | InterPro:DLC_sf | InterPro:Dynein_light_1/2_CS | InterPro:Dynein_light_chain_typ-1/2 |
| GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005868 | GO:GO:0005874 |
| GO:GO:0005875 | GO:GO:0006810 | GO:GO:0007017 | GO:GO:0008092 | GO:GO:0008150 | GO:GO:0008574 |
| GO:GO:0009987 | GO:GO:0010970 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0030286 | GO:GO:0045505 |
| GO:GO:0051959 | GO:GO:0060271 | GO:GO:2000582 | InterPro:IPR037177 | RefSeq:NP_001329326.1 | RefSeq:NP_193328.4 |
| ProteinID:OAO98199.1 | PFAM:PF01221 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01239 | PANTHER:PTHR11886 | UniProt:Q84VW0 |
| SMART:SM01375 | SUPFAM:SSF54648 | UniParc:UPI000000C487 | : | : | : |
Description
At4g15930 [Source:UniProtKB/TrEMBL;Acc:Q84VW0]
Coordinates
chr4:+:9036169..9038075
Molecular Weight (calculated)
13793.4 Da
IEP (calculated)
9.011
GRAVY (calculated)
-0.595
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDGRRKKSV NGGAPAQTIL DDRRSSLPEV EASPPAGKRA VIKSADMKDD MQKEAIEIAI SAFEKYSVEK DIAENIKKEF DKKHGATWHC IVGRNFGSYV
101: THETNHFVYF YLDQKAVLLF KSG
101: THETNHFVYF YLDQKAVLLF KSG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.